Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1363g00009 ATGGTGTCAAGGTCGTATTCAAATTTACTGGAGCTGGCCTCTGGTGAGTCTCCATCATTTGGGAACATGAACAGGCGAATTCCGCGGATTATGACTGTGGCTGGGTTGATATCTGATGTTGATGATGACCCTGACAAGAGTGTGTGCTCTGATCCCTCTTCTTCATCGGCCCAACGAGAAAGGATCATAATAGTGGGGAATCAGCTCCCTATAAGGGCTCAGAGGAAGCTAGATGGTAACAGGAATTGGTTTTTCAGTTGGGATGAAAATTCACTTCTGCTCCAACTCAAAGATGGATTTGGGGATGATGATATTGAGGTCATTTATGTTGGATGCCTTAAGGAAGAAGTGCATCCAAATGAGCAAGATGAGGTTTCACAGATACTACTTGAGTCCTTTAAATGTGTCCCAACTTTTCTCCCACCTGATCTGTTTACCAGGTACTATCATGGCTTTTGCAAGCAACAGTTATGGCCACTGTTTCATTACATGTTACCTCTGTCACCGGGCCTTGGTGGCAGGTTTAATAGGTCACTGTGGCAAGCTTATGTCTCAGTGAATAAGATATTTGCAGATAGGATTATGGAAGTCATTAACCCTGAAGATGATTATGTGTGGATACATGATTATCATCTGATGGTGTTACCAACTTTCCTGAGGAAGAGATTTAACCGAGTGAAACTTGGATTCTTCCTCCATAGCCCATTCCCTTCATCGGAAATATACAAGACATTGCCTATTAGGGAAGAGCTCTTGAGAGGGCTTGAGTATTATGGTAGAACCATTAGTATCAAAATTCTTCCCGTTGGCATAGACATGGGTCAGCTTCAATCAGTTCTAGACCTGCCAAAGACTGAAGAAAAAGTTTCTGAGCTCATTAGACAGTTTTCTGATCAAGGCAAGACAATGTTACTTGGGGTGGATGACATGGATATTTTTAAGGGCATAAGTTTGAAGCTATTGGCCATGGAGCAGCTTCTCATTCAGCACCCTGAATGTCTGGGAAAGGTTGTATTGGTCCAGATAGCTAATCCTGCCAGGGGACGAGGGAAAGACGTGAAGGAAGTGCAAACTGAGATGAAAGCAACCGTAAAACGGATTAATGAAACATTTGGGAAGCCTGGGTATGATCCTGTCATTCTGATTGAGGAGCCACTAAGCTTTTATGAGAGAGTTGCCTACTATGTTGTTGCTGAGTGTTGTCTAGTGACTGCAGTCAGGGATGGAATGAATCTCATACCATATGAATATATAATCAGTCGTCAAGGCAATGAAAAATTGGATAAAGTATTGGGACTAGCTTCCTCCCCAAAGAAAAGCATGTTAGTTGTCTCTGAGTTCATTGGCTGTTCCCCATCTTTAAGTGGAGCAATCAGAGTGAACCCATGGAATATTGATGCAGTAGCAGATGCAATGGACTCAGCCCTGGAAATGGCTGATTCAGAGAAACAGCTTAGGCATGAGAAGCATTACAGATATGTTAGTACTCATGATGTTGGGTACTGGGCTCGTAGCTTCTTGCAAGATTTGGAAAGGACTTGTAGTGATCATGTACGGCGAAGGTGGTGGGGAATTGGTTTTGGATTAAGTTTTAGAGTTGTAGCACTTGATCCAAACTTCAGGAAGCTCTCAATGGAGCACATAGTTTCAGCTTACAAACGGACGACGACTAGAGCTATCCTTCTAGATTATGATGATACACTGATGCCACAGGCTTCCATTGATAAGAGCCCATCCAGTAATTCTATTAAAATGCTTAATAGTTTGTGTAGAGATAAGAACAATACGGTATTTCTTGTCAGTGCCAGAAGCCGAAAGACACTTGCTGAATGGTTTTCTCCTTGTGAAAATCTGGGAATTGCTGCTGAGCATGGTTACTTTTTAAGACTGAAGGGAGATGCAGAATGGGAAACATGTGGACCTGCAATAGACTGTAGTTGGAAACAAATTGCAGAGCCTGTAATGAGGCTGTATACTGAAACAACTGATGGATCCACCATTGAAGATAAGGAGACAGTACTTGTTTGGTGCTATGAGGATGCAGATCCAGATTTTGGATCATGCCAAGCTAAGGAACTTCTTAATCATCTTGAAAGTGTGCTTGCAAATGAACCAGTAACAGTCAAGAGTGGCCAGAATATTGTGGAGGTTAAACCACAGGGCGTGAGCAAGGGGCTTGTGGCCGAACGCCTACTTTCCACCATGCAAGGAAAGGAAATTTCACCTGATTTTGTTTTGTGTATAGGAGATGACCGGTCTGATGAAGATATGTTTGAGGTAATCACTAGTTCTATATCTGGTCCTTCCATGGCACCCAGGGCTGAAGTATTTGCATGCACTGTTGGTCAAAAGCCCAGTAAGGCTAAGTACTATCTGGATGATACTACTGAAATAGTGAGATTGGTGCAGGGTTTAGCCTGTGTTTCAGAGCAAACAGTTTTATTTTAG 2448 0.4269 MVSRSYSNLLELASGESPSFGNMNRRIPRIMTVAGLISDVDDDPDKSVCSDPSSSSAQRERIIIVGNQLPIRAQRKLDGNRNWFFSWDENSLLLQLKDGFGDDDIEVIYVGCLKEEVHPNEQDEVSQILLESFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPGLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDYVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRGLEYYGRTISIKILPVGIDMGQLQSVLDLPKTEEKVSELIRQFSDQGKTMLLGVDDMDIFKGISLKLLAMEQLLIQHPECLGKVVLVQIANPARGRGKDVKEVQTEMKATVKRINETFGKPGYDPVILIEEPLSFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKVLGLASSPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMADSEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCSDHVRRRWWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDDTLMPQASIDKSPSSNSIKMLNSLCRDKNNTVFLVSARSRKTLAEWFSPCENLGIAAEHGYFLRLKGDAEWETCGPAIDCSWKQIAEPVMRLYTETTDGSTIEDKETVLVWCYEDADPDFGSCQAKELLNHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAERLLSTMQGKEISPDFVLCIGDDRSDEDMFEVITSSISGPSMAPRAEVFACTVGQKPSKAKYYLDDTTEIVRLVQGLACVSEQTVLF 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1363g00009 815 Pfam Glycosyltransferase family 20 255 511 IPR001830 GO:0003824|GO:0005992
Gabi1363g00009 815 NCBIfam trehalose-phosphatase 558 805 IPR003337 GO:0003824|GO:0005992
Gabi1363g00009 815 CDD HAD_TPP 559 800 - -
Gabi1363g00009 815 Gene3D Glycogen Phosphorylase B; 50 259 - -
Gabi1363g00009 815 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 61 514 - -
Gabi1363g00009 815 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 254 806 IPR001830 GO:0003824|GO:0005992
Gabi1363g00009 815 FunFam Alpha,alpha-trehalose-phosphate synthase 279 495 - -
Gabi1363g00009 815 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 687 814 - -
Gabi1363g00009 815 FunFam Trehalose-6-phosphate synthase 2 641 720 - -
Gabi1363g00009 815 FunFam Trehalose-6-phosphate synthase 8 56 256 - -
Gabi1363g00009 815 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 557 674 - -
Gabi1363g00009 815 Pfam Trehalose-phosphatase 561 795 IPR003337 GO:0003824|GO:0005992
Gabi1363g00009 815 Gene3D Glycogen Phosphorylase B; 274 495 - -
Gabi1363g00009 815 NCBIfam HAD-IIB family hydrolase 560 762 IPR006379 -
Gabi1363g00009 815 CDD GT20_TPS 61 511 IPR001830 GO:0003824|GO:0005992
Gabi1363g00009 815 SUPERFAMILY HAD-like 558 805 IPR036412 -
Gabi1363g00009 815 Gene3D - 557 689 IPR023214 -
Gabi1363g00009 815 Gene3D - 690 813 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1363g00009 Gabi-Chr1363 86253 90520 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1363g00009 1 811 Trehalose Biosynthesis Gene Families AT1G68020 77.289 0.0 1368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1363g00009 K16055 - cit:102609352 1436.01