Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1363g00005 ATGAGCTTCTCAGAATGTTATAATAGTTCATCTTGCAAAGATGAAGGATTTCAGAGGCTTGGAAATGTTTCAGCGGATTGTATTCGTGGATTGTCCCAGTTGTCTACTCAATCGACATATTCCTTTGAGAATGATTTTCTTAAAAATACAGAAAGAAAGTGTATTACTGATATTAAAATTTCTACCGAGGTTATGACGTGTATTGCTTACGGAACTATCAAAGCAATTGAGAGTAAATACAACTGGTGGTACAAATCCTGTAAGAAATGCCCGTATTCTGTTTTTGAAGATTATGAGAAATGGTTTTGTAAAAACTGCCAAAAACATTGGAGTGATTATCAACCAAGATTCAGTGTTCAAGTCAGAGTTGTTGATAATACCGATTCTGCATCATTCATTCTCTTTGATAGAGATTGTGTTACTTTGTTGGGTATGAGTGCTTCTGATTTGCGTGAATTGCAATACAAGAGGGGTGCTGATTTGGAACATTATCCAAAAGAATTTGATGTTCTTATTGACAAGTCCATGCTGTTCAAGATTAATGTTAGAAAAAACAATTTTGACTCATACAATGAGCCTAAATATCAAGTTTCTAAAGTTTGCACCGACGAAACTATTATGTCTTCCTTCATCAAGTCTGCAACAGAATTAAATGATGAAACTCTGTTTGATCAAGCTTTCGACAATGACATTGTTGCTGCTGAAAATGGAAGAGCTGCGGATGTTGCGAGTCAGACATGTGAAAGTGCAGATCCTGTTAATGATTCTCTGTCTATGATTCTCTGCATTATTTTTTTTACGTTTTTTAATACAAATTATTGTCGTTTGTTTTGCTTGAAATTAACAGATGTTTGTACAATTGAGTTTCAAAAACGTGGGTTGCCTCATCTCATATTCTACTGTTCTTGCATTCCTCTAACAAGCCAGAAAATGCTCTCGATATTGACAAATTGA 954 0.347 MSFSECYNSSSCKDEGFQRLGNVSADCIRGLSQLSTQSTYSFENDFLKNTERKCITDIKISTEVMTCIAYGTIKAIESKYNWWYKSCKKCPYSVFEDYEKWFCKNCQKHWSDYQPRFSVQVRVVDNTDSASFILFDRDCVTLLGMSASDLRELQYKRGADLEHYPKEFDVLIDKSMLFKINVRKNNFDSYNEPKYQVSKVCTDETIMSSFIKSATELNDETLFDQAFDNDIVAAENGRAADVASQTCESADPVNDSLSMILCIIFFTFFNTNYCRLFCLKLTDVCTIEFQKRGLPHLIFYCSCIPLTSQKMLSILTN 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1363g00005 317 Pfam Replication factor-A C terminal domain 70 200 IPR013955 -
Gabi1363g00005 317 CDD RPA1_DBD_C 67 200 IPR047192 -
Gabi1363g00005 317 SUPERFAMILY Nucleic acid-binding proteins 50 201 IPR012340 -
Gabi1363g00005 317 Gene3D - 37 229 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1363g00005 Gabi-Chr1363 33348 35180 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1363g00005 73 201 Core DNA Replication Machinery Family AT5G61000 23.846 1.18e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1363g00005 - - adu:107466248 147.902