Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi135g00008 ATGGAAGCAGGAGAAGATTGTTGCGTGAAGGTTGCAGTCCATGTGCGACCGCTCATTAACGATGAGAAGGTTCTAGGCTGCAAAGATTGTGTAACCGTCGTTCCTGGGAAGCCTCAGGTACAAATTGGTGCCCATTCCTTTACATTTGATCATGTTTATGGGGGCACTGGTTCTCCCCCATCTGCCATGTTCGATGAATGTGTTGCTTCCCTTGTTGATGGTTTGTTCCAAGGATATAATGCTACTGTTCTGGCATATGGTCAGACAGGTTCTGGGAAAACATACACCATGGGCACTGGCTTTAAAGATGGTTGCCAAGCAGGAATAATACCCCAAGTTATGAGTGTCTTGTTTAACAAAATTGAGACCTTAAAGCATCAGATTGAATTTCAGTTGCATGTTTCCTTTATTGAGATTCTTAAAGAAGAAGTAAGAGACTTGCTGGACCCATCCTCTATGAGCAAACCAGAAACTGCAAACGGACATGCAGGGAAAATGACTAGTCCTGGGAAACCGCCAATTCAAATTCGTGAGACATCAAATGGTGTTATTACCCTAGCAGGATCTACTGAAGTCAGTGTGACAACACTAAAAGAAATGGCTGCTTACCTAGAACAAGGATCATCGAGTAGAGCTACTGGGAGCACAAATATGAACAACCAATCCAGTCGTTCACATGCCATCTTCACCATCACATTAGAGCAAATGCGGAAGCTCAATAGTCCTAGTGAGATCAGTTTAAATGATACCATGAATGAAGAGTATCTTTGTGCCAAGTTGCACTTAGTAGATCTTGCTGGATCAGAACGAGCTAAAAGAACAGGGTCTGATGGTCTGCGTTTTAAGGAAGGAGTTCACATTAACAAAGGCCTTCTAGCACTCGGTAATGTGATTAGTGCCCTTGGTGACGAAAAGAAGAGAAAAGAAGGTGTTCATGTTCCTTATAGGGATAGTAAACTTACTAGGCTTTTGCAGGACTCACTTGGCGGTAACAGCAGAACTGTTATGATAGCCTGCATAAGTCCTGCTGATATTAATGCTGAGGAAACCCTTAATACTTTGAAGTATGCAAATCGTGCGCGCAATATCCAAAATAAGCCTGTTGTCAATAGAGATCCCATGTCCAATGAAATGCTAAAGATGCGACAACAGCTAGAGTATTTGCAAGCAGAACTTTGTGCTCGTTCTGGTGGCTCTTCTGAGGAAGTTCAGGTCCTCAAGGAACGAATTACTTGGCTTGAAGCAGCTAATGAGGATCTTTGTCGTGAACTTCATGAATACCGTAGTAGATGCTCTGTTGTAGAACAATGTGAAAAGGATGCTTATGATGGTAGCACATACAATGTAAAGACTGATGGGCTTAAGAGGGGCTTACCTATCACAGCCTCTGATTATCCAATGGGTGAAACAACAGCAGGGGATTCAAGGGAAATTGAAGAAGTAGCAAAAGAGTGGGAGCACACACTTCTGCAAAATACTATGGATAGAGAGTTACATGAATTGAATAAACGCTTGGAGCAGAAAGAGTCTGAGATGAAGCTTTTTGGAGCAACTGATGCTGAAGCACTCAAGCATCACTTTGGGAGGAAAATAATGGAACTGGAGGATGAGAAGAGAGCTGTGCAGCGAGAGAGGGATCATCTTTTGGCTGAAGTTGAAAATCTTGCTGCCAATTCTGATGGACAAACACAGAAATCAGAGGATATCCATGCCCAAAAATTGAAAGCACTTGAAGTCCAGATTCTGGATCTGAAGAAGAAACAGGAGAACCAGGTTCAGCTTCTGAAGCAAAAGCAAAAAAGTGATGAAGCAGCAAAGCGACTGCAAGATGAAATACAATCTATAAAGGCCCAAAAGGTTCAATTGCAACAAAGGATAAAACAAGAGGCAGAACAGTTTCGCCAGTGGAAGGCTTCCAGAGAGAAAGAGCTGCTGCAATTAAGGAAGGAAGGAAGAAGAAATGAGTTTGAAAGGCATAAGCTGCAAGCTTTAAATCAGCGCCAGAAAATGGTCCTTCAGAGAAAGACTGAAGAAGCTGCAATGGCCACCAAGAGGTTAAAAGAGTTGTTAGAAGCTCGTAAATCTTCAAACCGAGATACTTCAGTTACAATGAATGGAAGTGGAACAAATGGACAGAGCAATGAGAAATCCTTCCAACGGTGGCTTGATCACGAGCTAGAAGTCATGGTAAAAGAGCATGAAGTTCGTTTTGAGTATGAGAAGCAGAGTCAAGTGCGAGCTGCTATTGCAGAGGAGTTAGCCATGCTGAAGCAAGTAAATGAGTTTGCTGCCAAGGGTCTCAGTCCTCCAAGAGAAAAGAATGGATTTGCTAGAGCATCCTCCATGTCACAAAATGCAAGAATGGCCAGAATAGCTTCACTTGAGAACATGCTGAGCATATCGTCTAGTTCACTTGTGGCAATGGCTTCTCAACTTTCTGAGGCAGAAGAACGAGAACGGGCTTTCACTAACCGTGGACGCTGGAACCAGTTGCGCTCAATGGGAGAAGCCAAGAATTTGCTTCAATATATGTTCAATTCTATTGCAGATGCTAGGTTCCAGCTGTGGGAAAAGGACATGGAGATCAGGGAAATGAAAGATCAAATCAAAGAACTTGTAGGTCTATTACGGCAAAGTGAGATTAAGAGAAAGGAAGTGGAGAAGGAACTAAAAGTGAGAGAGCAAGCTGTTGCAACCACATTGGCTACACCAGCTTCTGGAAACTCTCCAAATTCATTGAAACACTGCGCTGAAGACATCAAGGAACCTTTATCTCCAGAGTCTGTGCCAGTACAGAAACAGCTTAAATATACACCAGGCATTGCTAATGGCCAATTGAGGGAATCAGCAGCATTTATAGATCAGAGTAGAAGGATGGTACCCATTGGGCAACTGTCAATGAAAAAGTTAGCAATTGTAGGACAAGCCTCTGGCAAGCTATGGAGGTGGAAAAGAAGCCACCATCAGTGGCTACTACAATTCAAATGGAAGTGGCAGAAGCCATGGAAACTTTCTGAATGGATTCGACACAGTGATGAGACAGTCATGAGAGCAAGGCCACGTTCACAGGCTCTGCCAAATAGCATGTGA 3090 0.4314 MEAGEDCCVKVAVHVRPLINDEKVLGCKDCVTVVPGKPQVQIGAHSFTFDHVYGGTGSPPSAMFDECVASLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGCQAGIIPQVMSVLFNKIETLKHQIEFQLHVSFIEILKEEVRDLLDPSSMSKPETANGHAGKMTSPGKPPIQIRETSNGVITLAGSTEVSVTTLKEMAAYLEQGSSSRATGSTNMNNQSSRSHAIFTITLEQMRKLNSPSEISLNDTMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVVNRDPMSNEMLKMRQQLEYLQAELCARSGGSSEEVQVLKERITWLEAANEDLCRELHEYRSRCSVVEQCEKDAYDGSTYNVKTDGLKRGLPITASDYPMGETTAGDSREIEEVAKEWEHTLLQNTMDRELHELNKRLEQKESEMKLFGATDAEALKHHFGRKIMELEDEKRAVQRERDHLLAEVENLAANSDGQTQKSEDIHAQKLKALEVQILDLKKKQENQVQLLKQKQKSDEAAKRLQDEIQSIKAQKVQLQQRIKQEAEQFRQWKASREKELLQLRKEGRRNEFERHKLQALNQRQKMVLQRKTEEAAMATKRLKELLEARKSSNRDTSVTMNGSGTNGQSNEKSFQRWLDHELEVMVKEHEVRFEYEKQSQVRAAIAEELAMLKQVNEFAAKGLSPPREKNGFARASSMSQNARMARIASLENMLSISSSSLVAMASQLSEAEERERAFTNRGRWNQLRSMGEAKNLLQYMFNSIADARFQLWEKDMEIREMKDQIKELVGLLRQSEIKRKEVEKELKVREQAVATTLATPASGNSPNSLKHCAEDIKEPLSPESVPVQKQLKYTPGIANGQLRESAAFIDQSRRMVPIGQLSMKKLAIVGQASGKLWRWKRSHHQWLLQFKWKWQKPWKLSEWIRHSDETVMRARPRSQALPNSM 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi135g00008 1029 Coils Coil 672 692 - -
Gabi135g00008 1029 MobiDBLite consensus disorder prediction 150 176 - -
Gabi135g00008 1029 ProSiteProfiles Kinesin motor domain profile. 8 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi135g00008 1029 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 1020 IPR027640 GO:0003777|GO:0007018
Gabi135g00008 1029 FunFam kinesin-like protein KIN-4A isoform X1 2 391 - -
Gabi135g00008 1029 Gene3D Kinesin motor domain 2 391 IPR036961 -
Gabi135g00008 1029 Coils Coil 524 558 - -
Gabi135g00008 1029 Coils Coil 862 896 - -
Gabi135g00008 1029 Coils Coil 585 639 - -
Gabi135g00008 1029 ProSitePatterns Kinesin motor domain signature. 258 269 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gabi135g00008 1029 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 394 IPR027417 -
Gabi135g00008 1029 CDD KISc_KIF4 7 364 - -
Gabi135g00008 1029 MobiDBLite consensus disorder prediction 693 715 - -
Gabi135g00008 1029 PRINTS Kinesin heavy chain signature 313 334 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi135g00008 1029 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi135g00008 1029 PRINTS Kinesin heavy chain signature 259 277 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi135g00008 1029 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi135g00008 1029 MobiDBLite consensus disorder prediction 696 715 - -
Gabi135g00008 1029 Pfam Kinesin motor domain 39 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi135g00008 1029 SMART kinesin_4 6 371 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi135g00008 1029 Coils Coil 491 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi135g00008 Gabi-Chr135 109335 123903 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi135g00008 49 387 Calmodulin-binding Proteins AT5G65930 35.103 1.24e-53 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi135g00008 - - gmx:100786770 1839.7