Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi135g00006 ATGAGTAGCATGCCTGCAAAATTGTTGGTCTCAACTTTTTACATCCTCTTTGTGGCACTTCCTATTCACATGTCAGCACATGATATTAACAGAGACACACAAAATTTCATCAAAGGTGGTGGAGATGGTAGCTCAAGCAAAAGCTGCAACAACCAATTGAACACAAAACCAGTGGCTTCCACATGTCAAAAATCAACAATAACCATTCAAGCATCTCCAACTTTACCTTTCAAAACAAATGCTTTGGTATTTGCAGACCAAAGACTTGTAGTAGTGTACCCAGTTATCCAAAAATTCAAGTCCATCATCACCTCAGATCCCTTAGGAGTTACTAAATCTTGGGTAGGATCAGATATATGCAACTATAAAGGATTCTACTGTGATAATCCCCCAGATAACTCCTCTGCCATTGCTTTGGCCTCTGTTGACTTCAATGGCTTTCAACTTGGTGCTTCTACACTTGATGGGTTCATTGATAAGCTTCCTGATATTGCTCTCTTCCATGCAAATTCCAACAATTTCAAAGGAACCATCTCACCCCAAATCACCAAGTTACCTTATCTGTATGAGGTTGATGTAAGCAACAACCAATTGTCTGGTCCATTTCCCATGGCTGTTCTAGGCATGAGCACCCTAACATTCTTGGATATCCGGTTCAATTTCTTCACTGGGGCAGTCCCACCTCAGATTTTCACCCAGAATCTTGAAGTCCTCTTCATCAACAACAATATCTTCACACAGAGTTTGCCTGATAATTTAGGCACTACTCATATTCTCTTACTTACCTTAGCAAACAACAAATTCATGGGTCCAATACCTAGAAGTCTTCCCAAAGCTTTGTCCACTCTCACTGAGGTATTGTTAGTGAACAACCAGCTAACAGGTTGCTTGCCTTATGAGATTGGTTATCTTGAAAAAGCCACAGTGTTTGATGTTGGAAACAATCAGTTAACAGGTCCTTTACCATTCTCTTTGAGTTGCCTTGAGAAGGTGGAGCTGCTTAATTTGGCTGGTAATCTACTCTATGGCATGGTGCCAGAAATGGATCTTAATTCAGAATGGAGTTCTTGA 1071 0.4052 MSSMPAKLLVSTFYILFVALPIHMSAHDINRDTQNFIKGGGDGSSSKSCNNQLNTKPVASTCQKSTITIQASPTLPFKTNALVFADQRLVVVYPVIQKFKSIITSDPLGVTKSWVGSDICNYKGFYCDNPPDNSSAIALASVDFNGFQLGASTLDGFIDKLPDIALFHANSNNFKGTISPQITKLPYLYEVDVSNNQLSGPFPMAVLGMSTLTFLDIRFNFFTGAVPPQIFTQNLEVLFINNNIFTQSLPDNLGTTHILLLTLANNKFMGPIPRSLPKALSTLTEVLLVNNQLTGCLPYEIGYLEKATVFDVGNNQLTGPLPFSLSCLEKVELLNLAGNLLYGMVPEMDLNSEWSS 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi135g00006 356 Gene3D Ribonuclease Inhibitor 94 255 IPR032675 -
Gabi135g00006 356 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 61 347 - -
Gabi135g00006 356 Gene3D Ribonuclease Inhibitor 256 354 IPR032675 -
Gabi135g00006 356 SUPERFAMILY L domain-like 97 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi135g00006 Gabi-Chr135 84640 85890 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi135g00006 81 346 Leucine-rich Repeat extension Gene Families AT3G24480 43.985 2.15e-71 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi135g00006 - - gmx:100789584 539.65