Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1349g00005 ATGGCACAACCAGCAGCTTTGAAAGTTGTTCAACATTGCTCAGTGGAACCATTACATGGAACAACCACTTCCCCCACTCCAACCATTCTGCCAATTACATTCTTTGACCTCTTATGGCTAAGGTTTCCACCTGTTGAGCGTCTTTTCTTTTATGAATTCCCCAAACCAACCACTTCTTTCTTTGATTCTGTTCTTCCCACTCTCAAACACTCCCTTTCACTCACACTCCAACACTTCCTCCCTCTTGCTGGTAACATCACATGGCCTCTTCAATCTTCCACACCCATCATCAAATATGTCCCAGGTGATGCTGTCTCTTTCACTATAGCTGAGTCCAATGCTAGCTTCAACCATCTCTGTTCTGATCTCTGTGAAGCAGTGGAAAGATATTCCTTAATACCCCATTTGTCCACTTCACATGAACAAGCATCTGTGTTGGCTTTGCAAGTCACTGTGTTTCCAAACTTGGGGTTTTGTATTGGAATAACCACACACCATGCAGCTTTGGATGGAAAATCTTCAACTTTGTTTATGAAATCATGGGCTTATGCATGCTCTTCTAAGCTTGGAGAATCACAATCTTTATCATTACCTGAACATCTAACACCTTTCTTTGACAGATCAGTGATAAGGGAACCTACAGGAATCAGTGAAGTGTTTGTGGACGCATGGTTGAAGCATGGTGGACCAAATAATCGAAGTCTCAAGGTGTGGGAGTTCACTAATCCAATAGAAACCGATGCAGTTAAAGGTTTGTTTGAATTAACCCCCTCACATATCCAAAAGCTTAAGCAATATGCACACTCTAAGCTGAAAAAGAAGGTTCAATTATCAGCATTTTCAGTTATATGTGCTTATGTGTTGGCATGTTTAGTAAAAGCAGAACAACCAAAGTCCAATGGAGTACTTTTCATATTTGGTGTGGACTGTAGATCCCGCTTGGACCCTCCAATTCTTCCCAACTATTTAGGAAATTGCATTGCAGGCCAAATGGTTGTGGCTGAGACAAAGAGTTTACTAGAAAACGATGGATTCATTAGTGCTTTGGAGGGGATAAATGAAGCTTTGGATAGAGTGAAGGATGGAGTGCTCAGTGAGGTAGAAAATTGGATGTCATATATGCACAATTCAACGGAGGACAGAATTTTCTCTATTGCTGGATCGCCACGGTTTGAGGTTTATAGTATTGATTTTGGATGGGGAAGACCTAAGAAGGTGGATATGACTTCAATAGACAGAACAGCAGCATTTTCTCTTTCGGAAAGTAGGAATAACAATGGAGGAATTGAGATTGGACTGGTTTTAAAAAAGCATGAGATGGAAGCTTTTTCTGCCCTTTTAGTTCAAGGACTTGAATCCTTTTAA 1365 0.4088 MAQPAALKVVQHCSVEPLHGTTTSPTPTILPITFFDLLWLRFPPVERLFFYEFPKPTTSFFDSVLPTLKHSLSLTLQHFLPLAGNITWPLQSSTPIIKYVPGDAVSFTIAESNASFNHLCSDLCEAVERYSLIPHLSTSHEQASVLALQVTVFPNLGFCIGITTHHAALDGKSSTLFMKSWAYACSSKLGESQSLSLPEHLTPFFDRSVIREPTGISEVFVDAWLKHGGPNNRSLKVWEFTNPIETDAVKGLFELTPSHIQKLKQYAHSKLKKKVQLSAFSVICAYVLACLVKAEQPKSNGVLFIFGVDCRSRLDPPILPNYLGNCIAGQMVVAETKSLLENDGFISALEGINEALDRVKDGVLSEVENWMSYMHNSTEDRIFSIAGSPRFEVYSIDFGWGRPKKVDMTSIDRTAAFSLSESRNNNGGIEIGLVLKKHEMEAFSALLVQGLESF 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1349g00005 454 Gene3D - 6 234 IPR023213 -
Gabi1349g00005 454 PANTHER - 7 454 - -
Gabi1349g00005 454 SUPERFAMILY CoA-dependent acyltransferases 249 453 - -
Gabi1349g00005 454 Gene3D - 245 454 IPR023213 -
Gabi1349g00005 454 Pfam Transferase family 45 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1349g00005 Gabi-Chr1349 37953 39317 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1349g00005 36 449 Monolignol Biosynthesis Gene Families AT5G48930 24.091 3.90e-22 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1349g00005 - - gmx:100800849 597.045