Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1345g00009 ATGGATGAAAAAGAGAAGTTGTTGAAAGTGCTCAAGGAGCACAAGACAGCTATTGGGTGGTCTATTTCTGATTTGAAGGGCATCAACCATTCTTTCTGTACTCACAAGATGCTAATGGAAGACAATGTTAAACATGTGAGACAATCTCAGAGAAGACTAAACCCCACAAAGAAGGAAATCCATCAGTGGTATGAAGAACAATGTTCTAAATCTGGGAATTGGGGCCGCATACACGGAAATCGAGTGGGAGTGGTGGGGTGTGTTTTGTGGTGGTGGAATGAGCTCTGGTACGTTGTTCCTCTCAGAGTCAAGTGTTCAGCTTCTGGCACCAAGTTGCCACGAGGCCACATGGGCTTTCCTTTCGTTGGAGAAATGATTAGCTTCCTGTGGTACTTCAAATTTCTTGGACGCCCAGATGACTTTATCAATGCTAAGCGACGCAAATATGGCGATGGAGTAGGCATGTTCAGAACGCACCTCTTTGGGTCACCAACCATGATAGTATACACACCACCACTTAACAAATTTGTGCTCCATTCAGAGGACAAGTTCAAACAAGAATGGCCTACTGTTGAACTCATGGGTACTGCTTCCATGTTGGCAGTCCATGGGAAGGCCCATGCTCGGGTCCGCAGCTTTGTCACCAATTCCATAAACCGGCCTGACTCTCTACGCCGCATCGCTCTTCTTGTCCAACCTCGCATTGTCAATGCTCTTCAATCCTGGGCAAAAATGGGAAAAATCAATGCCAGAGTTGAAACCCATCAGCTGGGAATTCAGAACATTGGGAAATTATTTGCGAGCATGGAGCCAGGTCCTCTTCTGCATTCCTTGGATAAGCTCATTCATGGCATGCTTCCGGGATTGAGAGCCTACCCACTCAATTTTCCTGGTTTTGCTTATCATCATGCTTTCCAGTGTAGAAAGAAGATTGAGGACATTTTCTGGATGGAGTTAGGTAAGAGAAAGAACGAGACTGAGGGGGAAATAATTGATCTAATGGACGGTTTGATGCGTATTGAAGATGATGAAGGTCACAGATTGAGTGACATAGAAGTGGTACACAACATTGTTTCTCTAATGATTGGTGGATATGTCTCTACGGCCCTTGTATCGATGTGGGCTATTTACCTTCTTGCTAAGTATCCAACAGTGCTCAGAAAGCTAAGGGAAGAGAACACAGCTTTCAAAAAGGGAAGTCCGGGGGATTTTATTACCGCTGAAGATGTTTCAAATTTAACATACACAAACAAGGTCGTTGAAGAAACAATAAGAATGGCCAATGTTGCATCATTTGTTTTCAGAAAAGTTGAGAAAGAAATCAATTATAAAGGTTACAAGATTCCGAAGGGATGGAAAGTAATTTGCTTTCTTCGGTACTTTCAAACGAACCCAGAGAACTTTAAGGACCCCATGTATTTTAACCCTGATAGATGGAACGAGCCGGCAAAGCCTGGAACTTATCAAGTCTTCGGCGCTGGACAAAGACTATGCCCCGGAAACACGCTTGCTAGAATTCAACTTGCACTTCTGCTTCATCATTTATCCATAGGATACAAGTGGGAACTCCTTAACCCAAATGCAGATATGATATATCTTTCACATCCAGCACCAGTAGATGGGGTTGAAGTTAAGTTCAGCAAATTGTGA 1650 0.4358 MDEKEKLLKVLKEHKTAIGWSISDLKGINHSFCTHKMLMEDNVKHVRQSQRRLNPTKKEIHQWYEEQCSKSGNWGRIHGNRVGVVGCVLWWWNELWYVVPLRVKCSASGTKLPRGHMGFPFVGEMISFLWYFKFLGRPDDFINAKRRKYGDGVGMFRTHLFGSPTMIVYTPPLNKFVLHSEDKFKQEWPTVELMGTASMLAVHGKAHARVRSFVTNSINRPDSLRRIALLVQPRIVNALQSWAKMGKINARVETHQLGIQNIGKLFASMEPGPLLHSLDKLIHGMLPGLRAYPLNFPGFAYHHAFQCRKKIEDIFWMELGKRKNETEGEIIDLMDGLMRIEDDEGHRLSDIEVVHNIVSLMIGGYVSTALVSMWAIYLLAKYPTVLRKLREENTAFKKGSPGDFITAEDVSNLTYTNKVVEETIRMANVASFVFRKVEKEINYKGYKIPKGWKVICFLRYFQTNPENFKDPMYFNPDRWNEPAKPGTYQVFGAGQRLCPGNTLARIQLALLLHHLSIGYKWELLNPNADMIYLSHPAPVDGVEVKFSKL 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1345g00009 549 PRINTS P450 superfamily signature 418 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1345g00009 549 PRINTS P450 superfamily signature 363 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1345g00009 549 PRINTS P450 superfamily signature 489 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1345g00009 549 PRINTS P450 superfamily signature 498 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1345g00009 549 PANTHER CYTOCHROME P450 26 111 534 - -
Gabi1345g00009 549 SUPERFAMILY Cytochrome P450 109 546 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1345g00009 549 PRINTS E-class P450 group I signature 372 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1345g00009 549 PRINTS E-class P450 group I signature 352 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1345g00009 549 PRINTS E-class P450 group I signature 417 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1345g00009 549 PRINTS E-class P450 group I signature 457 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1345g00009 549 PRINTS E-class P450 group I signature 488 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1345g00009 549 PRINTS E-class P450 group I signature 498 521 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1345g00009 549 Gene3D Cytochrome P450 102 549 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1345g00009 549 Pfam Cytochrome P450 125 523 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1345g00009 549 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 491 500 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1345g00009 Gabi-Chr1345 208220 224365 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1345g00009 112 548 Cytochrome P450 AT2G32440 32.584 1.02e-87 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1345g00009 - - vvo:131636230 740.339