Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1345g00003 ATGACCATTGATATGCCCCAATCCATAGCCCAAAATGTTAGGGCAAGCAGATCTTCCTTTAGCTCTAGCAATGCCAATGAGGATACCCCTGTACGCAACTATGCTTCTGTTAGCAATGATGATGACTATGACAGTGATAGCACCAATTTTGCACCACCCACGCCAGTGGCTGTTCCAGCAGAACTCGCTGGAGCTGTACCCTTGATTGACAGATTCCAAGTGGATGGATTTTTAAAATTAATGCAGAAACAAATTCAATCTGCTGGGAAACGTGGGCTATTTTCTAAAAGATCTATAGGTACCCAAGTTCGAGAAAAATTTACATTTGAGGACATGATGTGTTTTCAAAAGGATCCAATTCCAACCTCATTGCTTAAGATTAATGGTGATTTAGTAAGTCGGGCAACAAAATTATTCCAGATAATTTTGAAATATATGGGAGTTGATTCCTCTGATCGTGTAACTCCAATAAGCTTAGACGAACGAGTTGAGCTTGTAGGGAAACTATACAAGCAAAGTTTGAAACGTTCAGAACTCCGAGATGAACTTTTTGTTCAGATATCAAAACAAACAAGAAATAACCCTGAGAGGCAATACTTGATTAAAGCATGGGAGCTCATGTATTTATGTGCATCCTCCATGCCTTCAAGTAAAGAAATTGGGGGTTATCTATCGGAATATGTTCATAACATAGCACATGGTGTGACTACTGATCCTGAGATCCAAGCCCTTGCATTAAGTACATTAAATGTATTGAAGCGTTCTGTCAAGGCTGGTCCCAGACATATAATACCTGGGCGTGAGGAGATTGAAGCTCTGTTGACGGGGAGAAAGCTTACAACTATAGTGTTCTTCCTAGATGAAACATTTGAAGAAATTACATATGACATGTCAACTACAGTTGCTGATGCTGTTGAGGAACTTGCAGGGCTCATTAAACTGTCAACATACTCTAGCTTTAGTCTGTTTGAATGTCATAAAGTTGTTACTGGCTCCAGATCACCTGATCCTGGGAATGAGGAGTACTTTGGGTTAGATGATAACAAATATATTGGGGATCTCCTGGCTGAATTTAAAGCAGCAAAGGATCGAAGTAAGGGAGAAATCTTGCATTGTAAACTGATTTTCAAGAAAAAGTTATTTCGCGAGTCAGATGAAGCTGTGACAGATCCAATGTTTGTGATATTGTCCTATGTACAATTGCAGCATGATTATATTTTGGGTAATTACCCTATTGGAAGGGATGATGCTGCTCAGCTTTGTGCGTTACAAATCTTGGCTGAGATTGGATTTGTTAGCACACCTGAATCGTGCACTAACTGGAATTTACTTCTAGAGCAATTCCTGCCTAGACAAGTTTCAATGACACGAGGGAAACGGGAATGGGAGTTTGACATACTTTCTCGTTATCAGTCATTGGAGCATTTGACAAAAGATGATGCAAGACAACAATTTCTGCGTATATTGAGAGCACTTCCTTATGGGAATTCTGTTTTCTTCAATGTTCGCAAGATTGATGACCCTATTGGGCTCCTACCTGGACGAATAATGTTGGGAATTAATAAAAGAGGGATTCATTTTTTCCGTCCAGTTCCTAAGGAATATTTGCACTCAGCTGAGTTGAGAGACATAATGCAATTTGGAAGCAGCAATACTGCAGTATTTTTTAAAATGCGAGTTGCAGGAGTTCTTCACATATTCCAGTTTGAAACCAAGCAGGGAGAAGAAATTTGTGTAGCTCTTCAGACACATATAAACGATGTTATGCTGCGCCGCTATTCGAAAGCACGATCTGTGGCTACTGGTTCTTTGAATGAAGATACTTCTAGTAATTTTAAGCCTCCTAATTTGGAATTATATGAGAAGCGTGTAAAAGATTTATCAAAACTTGCTGAAGAATCTCAAAGAAATGCTGATCAAGTGCTTGAAGAATTGCGTGAGAAGCAAAAACAAGAAGAGAAAATGCAAGAAGAATTGGAGGGCTTGAAAGAATCCTTAAAAACTGATAAGCAAAATCTTGAGGCTGTTACAAGTGAGCGGGATAGGCTTAGATCATTATGCAATGAAAAAGATAAGGCACTACAGGTTACAATTCTAGAGAAAAGGAACATGGAAGCAAGGGTGGCCAAGTTGAATAATCTAGTGATTGAGAACACTTCCAAAAAGGATCTTGTTGGAGCAGCTAATAACAGAATGCTACCAAAGCTTGAAGATGAGCTAAAACTTTGTAAAGATGAGCTGCTTGCAGCTGAAGAAACTATTAGAAGGTTGTCAAGTGAAAAATTGATTTTGGAACAGAAGCTAATTGCGCATGAGAAAAGGAATGCTGAAGAGATTAGTTCTCTTCAACGGAAACTCGAGCAAGAATGCAAAACTGGGAAATCTGAAGTTTATGACCTTGAAAGGAAGCTAGAAGGATGTATACAAGAATTAGTGGCTGCTAAGTCTGCTATTTCAGTAAAGGATTCTGAGTTGGCTGCGTTGCAGAATGAATTGAAGGAACTAGAAGAATTGAGAGAAATGAAAGAGGACATTGATAGAAAGAATGAACAAACAGCTGCCATACTGAAGATGCAAGGAGCTCAACTAGCTGAAATGGAAGTGCTATATAAGGAAGAGCAGGTTCTAAGGAAGCGTTATTTTAATACAATAGAAGATATGAAAGGCAAGATCAGAGTTTATTGTCGACTAAGACCTCTTAGTGAAAAAGAGATTGCTGAGAAAGAAAGAGAAGCTCTTACTACAGTAGATGAGTTTACAGTTGAATATCTATGGAAAGATGATAAACCAAAGCAGCACATATATGATCGCGTTTTTGATGGTGATGCAACTCAAGAAACCGTATTTGAGGATACAAGGTATTTGGTGCAATCTGCGGTAGATGGTTATAATGTCTGCATATTTGCTTATGGTCAAACTGGCTCTGGAAAGACATTTACAATCTATGGATATGAAAACAACCCTGGAATTACCCCGCGTGCTACTGCAGAACTTTTTAGAATTTTGAAGAGAGATAATAACAAGTATTCTTTTTCATTGAAGGCATACATGGTGGAGTTATATCAAGATACCCTTATAGATCTTCTGTTACCTAAGAATGCAAAGCATTTAAAATTGGATATCAAGAAGGATCCGGCGGGAATGGTTGTTGTGGAAAATGTAACAGTTGTGCCAATTTCTACAATAGAAGAATTAAATAGCATAATACAAAGAGGATCTGAACGGAGGCATATATCAGGAACCCAAATGAATGAAGAAAGTTCAAGATCTCATCTTATTCTATCAATTGTAATTGAAAGCACTGACCTTCAAAGTCAATCAGTTGCAAGGGGAAAGCTGAGTTTTGTGGATCTAGCTGGTTCAGAAAGAGTGAAAAAGTCAGGTTCTACAGGTAGTCAACTTAAGGAAGCCCAAAGTATCAATAAGTCATTATCAGCACTTGGAGATGTTATTAGTGCTTTGTCTTCTGGTGGTCAACACACACCTTACAGGAATCACAAGTTAACTATGTTGATGAGTGATTCTCTTGGTGGTAATGCCAAAACTCTCATGTTTGTGAATGTTTCTCCAGCAGAATCAAGCTTGGATGAGACACATAACTCTCTCATGTATGCATCACGAGTGAGATCCATTGTGAATGACCCAAGCAAAAATGTGGATTCAAAAGAGATAGCAAGACTGAAGAAATCGGTTGCCTATTGGAAAGGGCAAGCTGGTAGAAGACTTGAGGATGAATTTTTGGAAGAAATTCAAGAAGATCGACCAAATAAAGAGAGGGTGGATAATCGTAGTAGCTTAGGTAAGTAG 3807 0.3861 MTIDMPQSIAQNVRASRSSFSSSNANEDTPVRNYASVSNDDDYDSDSTNFAPPTPVAVPAELAGAVPLIDRFQVDGFLKLMQKQIQSAGKRGLFSKRSIGTQVREKFTFEDMMCFQKDPIPTSLLKINGDLVSRATKLFQIILKYMGVDSSDRVTPISLDERVELVGKLYKQSLKRSELRDELFVQISKQTRNNPERQYLIKAWELMYLCASSMPSSKEIGGYLSEYVHNIAHGVTTDPEIQALALSTLNVLKRSVKAGPRHIIPGREEIEALLTGRKLTTIVFFLDETFEEITYDMSTTVADAVEELAGLIKLSTYSSFSLFECHKVVTGSRSPDPGNEEYFGLDDNKYIGDLLAEFKAAKDRSKGEILHCKLIFKKKLFRESDEAVTDPMFVILSYVQLQHDYILGNYPIGRDDAAQLCALQILAEIGFVSTPESCTNWNLLLEQFLPRQVSMTRGKREWEFDILSRYQSLEHLTKDDARQQFLRILRALPYGNSVFFNVRKIDDPIGLLPGRIMLGINKRGIHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSVATGSLNEDTSSNFKPPNLELYEKRVKDLSKLAEESQRNADQVLEELREKQKQEEKMQEELEGLKESLKTDKQNLEAVTSERDRLRSLCNEKDKALQVTILEKRNMEARVAKLNNLVIENTSKKDLVGAANNRMLPKLEDELKLCKDELLAAEETIRRLSSEKLILEQKLIAHEKRNAEEISSLQRKLEQECKTGKSEVYDLERKLEGCIQELVAAKSAISVKDSELAALQNELKELEELREMKEDIDRKNEQTAAILKMQGAQLAEMEVLYKEEQVLRKRYFNTIEDMKGKIRVYCRLRPLSEKEIAEKEREALTTVDEFTVEYLWKDDKPKQHIYDRVFDGDATQETVFEDTRYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGYENNPGITPRATAELFRILKRDNNKYSFSLKAYMVELYQDTLIDLLLPKNAKHLKLDIKKDPAGMVVVENVTVVPISTIEELNSIIQRGSERRHISGTQMNEESSRSHLILSIVIESTDLQSQSVARGKLSFVDLAGSERVKKSGSTGSQLKEAQSINKSLSALGDVISALSSGGQHTPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESSLDETHNSLMYASRVRSIVNDPSKNVDSKEIARLKKSVAYWKGQAGRRLEDEFLEEIQEDRPNKERVDNRSSLGK 1268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1345g00003 1268 FunFam Kinesin-like calmodulin-binding protein 834 1213 - -
Gabi1345g00003 1268 CDD FERM_B-lobe 396 492 IPR019748 -
Gabi1345g00003 1268 SMART B41_5 275 499 IPR019749 -
Gabi1345g00003 1268 SUPERFAMILY Second domain of FERM 377 494 IPR035963 -
Gabi1345g00003 1268 Gene3D MyTH4 domain 91 276 IPR038185 -
Gabi1345g00003 1268 ProSiteProfiles MyTH4 domain profile. 115 274 IPR000857 GO:0005856
Gabi1345g00003 1268 SMART kinesin_4 888 1219 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi1345g00003 1268 PANTHER MYOSIN VII, XV 3 896 - -
Gabi1345g00003 1268 Coils Coil 733 789 - -
Gabi1345g00003 1268 Gene3D - 1214 1262 - -
Gabi1345g00003 1268 Pfam Kinesin motor domain 896 1211 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi1345g00003 1268 Gene3D - 497 605 IPR011993 -
Gabi1345g00003 1268 Coils Coil 818 855 - -
Gabi1345g00003 1268 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 890 1237 IPR027417 -
Gabi1345g00003 1268 PRINTS Kinesin heavy chain signature 1081 1098 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi1345g00003 1268 PRINTS Kinesin heavy chain signature 1112 1130 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi1345g00003 1268 PRINTS Kinesin heavy chain signature 1161 1182 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi1345g00003 1268 PRINTS Kinesin heavy chain signature 962 983 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi1345g00003 1268 SMART MyTH4_1 115 274 IPR000857 GO:0005856
Gabi1345g00003 1268 Gene3D - 391 492 IPR014352 -
Gabi1345g00003 1268 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 278 381 - -
Gabi1345g00003 1268 CDD FERM_C_KCBP 496 602 - -
Gabi1345g00003 1268 FunFam Kinesin-like calmodulin binding protein 382 493 - -
Gabi1345g00003 1268 SUPERFAMILY PH domain-like 499 587 - -
Gabi1345g00003 1268 SUPERFAMILY Prismane protein-like 833 894 IPR011254 GO:0003824|GO:0016491
Gabi1345g00003 1268 Coils Coil 617 679 - -
Gabi1345g00003 1268 MobiDBLite consensus disorder prediction 1 51 - -
Gabi1345g00003 1268 Gene3D - 278 382 - -
Gabi1345g00003 1268 ProSiteProfiles Kinesin motor domain profile. 890 1211 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi1345g00003 1268 ProSiteProfiles FERM domain profile. 279 593 IPR000299 GO:0005856
Gabi1345g00003 1268 Pfam MyTH4 domain 168 272 IPR000857 GO:0005856
Gabi1345g00003 1268 CDD KISc_C_terminal 888 1213 - -
Gabi1345g00003 1268 ProSitePatterns Kinesin motor domain signature. 1111 1122 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gabi1345g00003 1268 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 497 606 - -
Gabi1345g00003 1268 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 94 276 - -
Gabi1345g00003 1268 Pfam FERM central domain 385 499 IPR019748 -
Gabi1345g00003 1268 Gene3D Kinesin motor domain 832 1212 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1345g00003 Gabi-Chr1345 19720 31394 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1345g00003 51 1262 Calmodulin-binding Proteins AT5G65930 74.465 0.0 1848
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1345g00003 - - adu:107475586 2055.03