Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1345g00002 ATGACCAAACCATGGAGACTCTTGGGTACTCAATCAGAAACCAAGAAAATATCATTATTGGTTTCATTGACACGGGAATTTGGCCAGAATCCCCAAGCTTCAGTGACACCGACATGCCTGCAGTGCCATCCGGGTGGAAGGGTCAATGTCAAACAGGAGAAGCATTCAATGCCTCATCTTGCAACAGTGATTGGAGCAAGATACTATATGAATGGATATGAAGCAGAGGAAGGGTCAGATGCAAAAGTCTCCTTCAGATCTCCAAGGGATAGCACTGGTCATGGGAGCCATACAGCTTCTATAGCTGCAGGGCGCTATGTGGCAAACATGAATTATATGGGACTGGCTGCTGGAGGAGCCAGAGGAGGTGCACCTATGGCTAGGATTGCTGTGTACAAAACATGTTGGGATTCAGGTTGCTATGATGTGGACTTGCTAGCTGCATTTGATGATGCCATAAGAGATGGGGTTCACATTTTGTCTCTGTCTCTGGGTGCTGAATCCCCCCAAGGAGACTATTTCAATGATGCCATATCTATTGGGTCATTTCATGCTGCTAATCGTGGAGTGCTGGTTGTTGCATCAGCTGGAAATGAAGGAAATCCTGGTTCTGCTACAAACCTTGCACCATGGATGCTCACTGTTGCTGCCAGCTCAACAGATAGGGATTTCACTTCTGATATCACATTAGGCAGTGGTGTTAAAATCACGGGTGAAAGTCTCAGTCTCTTTGAAATGAATGCCTCCACAAGGATAATTTCTGCTTCCGAAGCCTTTGCAGGATATTTTACTCCTTATCAATCCAGTTACTGCTTAGAGAGTTCTTTGAATAAAACTAAGACCAAAGGGAAGGTTCTGGTGTGTAGACATGTAGAGAGTTCAACGGAGTCAAAGGTGGCAAAGAGCAAGATAGTGAAAGAGGCAGGTGGAGTTGGCATGATACTTATTGATGAGACAGATCAAGATGTTGCCATCCCATTCGTGATCCCTTCAGCTATTGTTGGAAGAAAAATAGGAGAAAAGATTCTATCCTATCTCAAGAGAACACGTATGCCTTTGTCAAGGATATTTAGAGCAAAGACAGTACTAGGAGCTCAACCTGCACCCCGTGTGGCAGCATTTTCTTCTAAAGGCCCCAATGCTTTAAACCCAGAAATTTTGAAGCCTGATGTCACAGCTCCAGGACTAAATATCCTGGCAGCATGGTCTCCAGCTGCTGGAAACATGTTCAACATTCTCTCAGGAACTTCTATGGCTTGTCCTCATGTAACTGGAATTGCAACCCTAGTCAAAGCTGTCCATCCTTCTTGGTCTCCATCTGCTATCAAATCTGCCATCATGACAACTGCTACAATTCTAGATAAGCGCCACAGACCCATCAAAGCAGATCCTGAACAAAGAAGGGCTAATTCATTTGATTATGGATCAGGGTTTGTGAACCCTGCAAGAGTTCTTGAGCCTTATCTCATCTATGATTCAGAACCAACAGATTTTGTTGCATTCCTCTGTTCAATTGGTTATGATCAGCGGTCACTCCATCTTGTTACTAGAGACAACAGCACATGTGATAGGGCATTCAGTACTGCATCTGACCTAAACTATCCATCTATTACAGTGCCTAATCTTAAGAACAATTTTTCAGTTACTCGGGTTGTGACTAATGTTGGAAAAGCAAGAAGTATATATAAAGCTGTAGTGTCTTCACCCCCTGGTGTTGATGTCACTGTTATGCCGAACCGGTTAATCTTCACAGGAATTGGGCAGAAAATCAAGTTCACTGTGAATTTCAAAGTAACAGCTACCTCAAAGGGATATGCATTTGGGTTCTTGTCATGGACGAATAGAAGATCACAAGTCACCAGTCCTTTGGTTGTCCAGGTTGCACATGGAAATCATGGGTTGATCAGATAG 1911 0.4375 MTKPWRLLGTQSETKKISLLVSLTREFGQNPQASVTPTCLQCHPGGRVNVKQEKHSMPHLATVIGARYYMNGYEAEEGSDAKVSFRSPRDSTGHGSHTASIAAGRYVANMNYMGLAAGGARGGAPMARIAVYKTCWDSGCYDVDLLAAFDDAIRDGVHILSLSLGAESPQGDYFNDAISIGSFHAANRGVLVVASAGNEGNPGSATNLAPWMLTVAASSTDRDFTSDITLGSGVKITGESLSLFEMNASTRIISASEAFAGYFTPYQSSYCLESSLNKTKTKGKVLVCRHVESSTESKVAKSKIVKEAGGVGMILIDETDQDVAIPFVIPSAIVGRKIGEKILSYLKRTRMPLSRIFRAKTVLGAQPAPRVAAFSSKGPNALNPEILKPDVTAPGLNILAAWSPAAGNMFNILSGTSMACPHVTGIATLVKAVHPSWSPSAIKSAIMTTATILDKRHRPIKADPEQRRANSFDYGSGFVNPARVLEPYLIYDSEPTDFVAFLCSIGYDQRSLHLVTRDNSTCDRAFSTASDLNYPSITVPNLKNNFSVTRVVTNVGKARSIYKAVVSSPPGVDVTVMPNRLIFTGIGQKIKFTVNFKVTATSKGYAFGFLSWTNRRSQVTSPLVVQVAHGNHGLIR 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1345g00002 636 Gene3D Peptidase S8/S53 domain 58 498 IPR036852 GO:0004252|GO:0006508
Gabi1345g00002 636 SUPERFAMILY Subtilisin-like 78 489 IPR036852 GO:0004252|GO:0006508
Gabi1345g00002 636 Pfam Subtilase family 79 456 IPR000209 GO:0006508|GO:0008236
Gabi1345g00002 636 Gene3D - 221 363 - -
Gabi1345g00002 636 Pfam Fibronectin type-III domain 531 625 IPR041469 -
Gabi1345g00002 636 CDD PA_subtilisin_like 227 356 - -
Gabi1345g00002 636 FunFam Subtilisin-like protease SBT1.5 502 628 - -
Gabi1345g00002 636 PRINTS Subtilisin serine protease family (S8) signature 414 430 IPR015500 -
Gabi1345g00002 636 PRINTS Subtilisin serine protease family (S8) signature 90 103 IPR015500 -
Gabi1345g00002 636 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 62 625 IPR045051 -
Gabi1345g00002 636 ProSitePatterns Serine proteases, subtilase family, serine active site. 415 425 IPR023828 -
Gabi1345g00002 636 Coils Coil 635 636 - -
Gabi1345g00002 636 Pfam PA domain 259 342 IPR003137 -
Gabi1345g00002 636 Gene3D - 502 628 - -
Gabi1345g00002 636 ProSiteProfiles Serine proteases, subtilase domain profile. 1 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1345g00002 Gabi-Chr1345 13010 16748 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1345g00002 63 627 Subtilisin-like Serine Gene Family AT3G14240 42.691 3.18e-147 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1345g00002 - - gmx:100808547 1001.89