Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1345g00001 ATGTCTTCTTCTAGTTATGGTATAAGCAGTACACTCTTTTATCTGTTTCTCTCGGTGCTTCTTGCAAAAGTTAGCTTTTGCTTTTCTACCAAGGTTTATGTAGTGTACATGGGAAGCAAAACTGGTGAACACCCACATGATATTCTGAAGCAAAACCATCAAATGCTTGCTGCTGTTCACAGTGGAAGCATTGAGCAAGCCCAAGCTTCCCATGTTTATAGCTACAGACATGGTTTCAGAGGCTTTGCAGCCAAGCTTACTGATGAACAGGCTTCCCAAATTTCTAAAATGGCAGGAGTGGTTTCTGTTTTTCCAAATTATAAAAGAAAGCTGCACACAACTCATTCATGGGATTTCATGGGACTTCTGGATGACCAAACCATGGAGACTCTTGGGTACTCAATCAGAAACCAAGAAAATATCATTATTGGTTTCATTGACACGGGAATTTGGCCAGAATCCCCAAGCTTCAGTGACACCGACATGCCTGCAGTGCCATCCGGGTGGAAGGGTCAATGTCAAACAGGAGAAGCATTCAATGCCTCATCTTGCAACAGGAAAGTGATTGGAGCAAGATACTATATGAATGGATATGAAGCAGAGGAAGGGTCAGATGCAAAAGTCTCCTTCAGATCTCCAAGGGATAGCACTGGTCATGGGAGCCATACAGCTTCTATAGCTGCAGGGCGCTATGTGGCAAACATGAATTATATGGGACTGGCTGCTGGAGGAGCCAGAGGAGGTGCACCTATGGCTAGGATTGCTGTGTACAAAACATGTTGGGATTCAGGTTGCTATGATGTGGACTTGCTAGCTGCATTTGATGATGCCATAAGAGATGGGGTTCACATTTTGTCTCTGTCTCTGGGTGCTGAATCCCCCCAAGGAGACTATTTCAATGATGCCATATCTATTGGGTCATTTCATGCTGCTAATCGTGGAGTGCTGGTTGTTGCATCAGCTGGAAATGAAGGAAATCCTGGTTCTGCTACAAACCTTGCACCATGGATGCTCACTGTTGCTGCCAGCTCAACAGATAGGGATTTCACTTCTGATATCACATTAGGCAGTGGTGTTAAAATCACGGGTGAAAGTCTCAGTCTCTTTGAAATGAATGCCTCCACAAGGATAATTTCTGCTTCCGAAGCCTTTGCAGGATATTTTACTCCTTATCAATCCAGTTACTGCTTAGAGAGTTCTTTGAATAAAACTAAGACCAAAGGGAAGGTTCTGGTGTGTAGACATGTAGAGAGTTCAACGGAGTCAAAGGTGGCAAAGAGCAAGATAGTGAAAGAGGCAGGTGGAGTTGGCATGATACTTATTGATGAGACAGATCAAGATGTTGCCATCCCATTCGTGATCCCTTCAGCTATTGTTGGAAGAAAAATAGGAGAAAAGATTCTATCCTATCTCAAGAGAACACGTATGCCTTTGTCAAGGATATTTAGAGCAAAGACAGTACTAGGAGCTCAACCTGCACCCCGTGTGGCAGCATTTTCTTCTAAAGGCCCCAATGCTTTAAACCCAGAAATTTTGAAGCCTGATGTCACAGCTCCAGGACTAAATATCCTGGCAGCATGGTCTCCAGCTGCTGGAAACATGTTCAACATTCTCTCAGGAACTTCTATGGCTTGTCCTCATGTAACTGGAATTGCAACCCTAGTCAAAGCTGTCCATCCTTCTTGGTCTCCATCTGCTATCAAATCTGCCATCATGACAACTGCTACAATTCTAGATAAGCGCCACAGACCCATCAAAGCAGATCCTGAACAAAGAAGGGCTAATTCATTTGATTATGGATCAGGGTTTGTGAACCCTGCAAGAGTTCTTGAGCCTTATCTCATCTATGATTCAGAACCAACAGATTTTGTTGCATTCCTCTGTTCAATTGGTTATGATCAGCGGTCACTCCATCTTGTTACTAGAGACAACAGCACATGTGATAGGGCATTCAGTACTGCATCTGACCTAAACTATCCATCTATTACAGTGCCTAATCTTAAGAACAATTTTTCAGTTACTCGGGTTGTGACTAATGTTGGAAAAGCAAGAAGTATATATAAAGCTGTAGTGTCTTCACCCCCTGGTGTTGATGTCACTGTTATGCCGAACCGGTTAATCTTCACAGGAATTGGGCAGAAAATCAAGTTCACTGTGAATTTCAAAGTAACAGCTACCTCAAAGGGATATGCATTTGGGTTCTTGTCATGGACGAATAGAAGATCACAAGTCACCAGTCCTTTGGTTGTCCAGGTTGCACATGGAAATCATGGGTTGATCAGATAG 2286 0.4326 MSSSSYGISSTLFYLFLSVLLAKVSFCFSTKVYVVYMGSKTGEHPHDILKQNHQMLAAVHSGSIEQAQASHVYSYRHGFRGFAAKLTDEQASQISKMAGVVSVFPNYKRKLHTTHSWDFMGLLDDQTMETLGYSIRNQENIIIGFIDTGIWPESPSFSDTDMPAVPSGWKGQCQTGEAFNASSCNRKVIGARYYMNGYEAEEGSDAKVSFRSPRDSTGHGSHTASIAAGRYVANMNYMGLAAGGARGGAPMARIAVYKTCWDSGCYDVDLLAAFDDAIRDGVHILSLSLGAESPQGDYFNDAISIGSFHAANRGVLVVASAGNEGNPGSATNLAPWMLTVAASSTDRDFTSDITLGSGVKITGESLSLFEMNASTRIISASEAFAGYFTPYQSSYCLESSLNKTKTKGKVLVCRHVESSTESKVAKSKIVKEAGGVGMILIDETDQDVAIPFVIPSAIVGRKIGEKILSYLKRTRMPLSRIFRAKTVLGAQPAPRVAAFSSKGPNALNPEILKPDVTAPGLNILAAWSPAAGNMFNILSGTSMACPHVTGIATLVKAVHPSWSPSAIKSAIMTTATILDKRHRPIKADPEQRRANSFDYGSGFVNPARVLEPYLIYDSEPTDFVAFLCSIGYDQRSLHLVTRDNSTCDRAFSTASDLNYPSITVPNLKNNFSVTRVVTNVGKARSIYKAVVSSPPGVDVTVMPNRLIFTGIGQKIKFTVNFKVTATSKGYAFGFLSWTNRRSQVTSPLVVQVAHGNHGLIR 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1345g00001 761 Gene3D Peptidase S8/S53 domain 140 623 IPR036852 GO:0004252|GO:0006508
Gabi1345g00001 761 FunFam Subtilisin-like protease SBT1.5 627 753 - -
Gabi1345g00001 761 SUPERFAMILY Subtilisin-like 111 614 IPR036852 GO:0004252|GO:0006508
Gabi1345g00001 761 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 28 112 IPR037045 -
Gabi1345g00001 761 Gene3D - 346 488 - -
Gabi1345g00001 761 Gene3D - 627 753 - -
Gabi1345g00001 761 Pfam Subtilase family 139 581 IPR000209 GO:0006508|GO:0008236
Gabi1345g00001 761 Pfam Peptidase inhibitor I9 32 112 IPR010259 -
Gabi1345g00001 761 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 750 IPR045051 -
Gabi1345g00001 761 CDD Peptidases_S8_3 110 576 IPR034197 -
Gabi1345g00001 761 Pfam PA domain 384 467 IPR003137 -
Gabi1345g00001 761 Pfam Fibronectin type-III domain 656 750 IPR041469 -
Gabi1345g00001 761 ProSiteProfiles Serine proteases, subtilase domain profile. 116 610 - -
Gabi1345g00001 761 FunFam Subtilisin-like protease SBT1.5 140 359 - -
Gabi1345g00001 761 FunFam Subtilisin-like protease SBT5.3 22 112 - -
Gabi1345g00001 761 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Gabi1345g00001 761 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Gabi1345g00001 761 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Gabi1345g00001 761 CDD PA_subtilisin_like 352 481 - -
Gabi1345g00001 761 ProSitePatterns Serine proteases, subtilase family, serine active site. 540 550 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1345g00001 Gabi-Chr1345 12312 16748 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1345g00001 8 751 Subtilisin-like Serine Gene Family AT4G10520 43.119 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1345g00001 - - gmx:100808547 1343.18