Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1342g00001 GTACAATTAATGAAGGTCTGGATCAAGAAAATGTTTGGAGAGAACCCAAAGCATTCCAACACTATTGCGAGGATAGTTAATAAACATCACTTCTTTAGATTGAAGAATCTTCTTGCTGATCAAGAGGTCAATAAATCTGCTGTTTATGGTGGCTCAATGGACGAAGAAAACTTATTTATTGAGCCGACAATCCTGGTGAATCCCCCACTTGAAGCAGCAATCATGGCAGAGGAAATATTTGGCCCATTGCTTCCAATTATTACTCTGGAGAAGATTGAGGACAGTATTAAATTCATAAGTTCTAGGCCTAAGCCTCTTGCCATTTATGCTTTCACCAAAAACAAAACACTGCAGAGAAGAATGGTATCTGAAACATCTTCTGGCAGCTTGACTTTCAACGATGCAATTATACAGTATGTAGCGGATTCTCTCCCATTTGGAGGAGTTGGTGAAAGTGGGTTTGGCATGTACCATGGGAAGTTCTCCTTTGACACATTCAGCCACCATAAGGCGATTGCCAGAAGAAGTTTCCTCACTGATTTTTGGTACAGGTATCCTCCATGGACACTCAATAAGTTTCAACTACTTGAGGTCTCTTACAACCTTGATTATCTTGGATTGCTCCTTGTCCTGTTGGGCTTAAAGAGACCTTCACAACGCAGATCTTATTTTGCTAGCTCGTGA 684 0.4079 VQLMKVWIKKMFGENPKHSNTIARIVNKHHFFRLKNLLADQEVNKSAVYGGSMDEENLFIEPTILVNPPLEAAIMAEEIFGPLLPIITLEKIEDSIKFISSRPKPLAIYAFTKNKTLQRRMVSETSSGSLTFNDAIIQYVADSLPFGGVGESGFGMYHGKFSFDTFSHHKAIARRSFLTDFWYRYPPWTLNKFQLLEVSYNLDYLGLLLVLLGLKRPSQRRSYFASS 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1342g00001 227 Pfam Aldehyde dehydrogenase family 14 172 IPR015590 GO:0016491
Gabi1342g00001 227 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 153 170 IPR016162 GO:0016491
Gabi1342g00001 227 SUPERFAMILY ALDH-like 3 189 IPR016161 GO:0016491
Gabi1342g00001 227 PANTHER ALDEHYDE DEHYDROGENASE 1 207 IPR012394 GO:0006081
Gabi1342g00001 227 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 2 152 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1342g00001 Gabi-Chr1342 570 2776 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1342g00001 1 216 Aldehyde Dehydrogenase Gene Family AT4G36250 56.944 1.02e-88 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1342g00001 K00128 - gmx:100784210 378.252