Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1341g00011 ATGGCGACGAAGGAGGAGGTTAACGTAACAAGGTCTCAAAACAAAGCGAGGCTTGCCATTTTGGAAATAGCACACATGATGAGTGTCCCAATGTCTCTCATTGCCGTCATCAACATGAAGGTACCTGACACCATATGGCAAGGTGGTTCCAACACTCCCCTCTCCGCTTCACAGATTCTTTCCCGCATTTGCCCCCATAGTGGCGGCGGCGCGGAGAACCTCCAGCGCATCCTCCGCTTGCTCACCAGTTATGATATTTTTACCGAGCACTTAAGCAGCACCGGCGAAAGAAAATACTTCCTCACCGACGTCGGCAAAACTCTTGTTGCCGATTACGAAGGTCTATCCTCCGCGCACTACGTGCTCCAGCATCATCAGGATGCGTTGATGCGAGCTTGGCCGTTGGTGGAGGAGGCAGTGGAGGATCCAACGGTGGAGCCATTCGTGAAGGTGAACGGAGAATCAGCAATAGCACATTACATGAAGCAGCCAGATATAATGGATTTGATATATAAGGCCTTATCTGGGATTTCCGTACCCTTCATGAGGGAAATGTTGGAGCTCTACGATGGCTTCCAAGGAGTGAAGACACTAGTTGACGTTGGTGGTAATTCTGGTGTGTGTCTACGCATGATAATGGAGAAATACCCAAATATACTTAAGGGCATCAACTATGATCTTCCCGATATGGTGGCTCTTGCACCACAGTTTCCAGGTATAACCCATGTCGGTGGAGATGCGTTTAAATATGTCCCTTCTGGGGATGCTATCTTCATCAAGTGGGTATTTTTAGGATTGACGGATGAAGAATGCAAGCAGGTCTTGGAGAATTGTCATAAGGCAATTCCGGTGGACGGAAAATTGATTGTTTGCGAGCCAGTGGCGCCGGAGTTGACCGATGAGAGTCAAAGAACAAGAGCATTGCTTGGGGGTGACATATTCGTAATGACAATATATAAGGGGAAGCACAGGACTGAACAACAATTTAAAAACCTCGCCATTTCTGCTGGTTTTTCTCATTCCAGTGCCTTCTATCTTGATTCTTATTTTGCTATACTTGAGTTTCAGAAATAA 1074 0.4693 MATKEEVNVTRSQNKARLAILEIAHMMSVPMSLIAVINMKVPDTIWQGGSNTPLSASQILSRICPHSGGGAENLQRILRLLTSYDIFTEHLSSTGERKYFLTDVGKTLVADYEGLSSAHYVLQHHQDALMRAWPLVEEAVEDPTVEPFVKVNGESAIAHYMKQPDIMDLIYKALSGISVPFMREMLELYDGFQGVKTLVDVGGNSGVCLRMIMEKYPNILKGINYDLPDMVALAPQFPGITHVGGDAFKYVPSGDAIFIKWVFLGLTDEECKQVLENCHKAIPVDGKLIVCEPVAPELTDESQRTRALLGGDIFVMTIYKGKHRTEQQFKNLAISAGFSHSSAFYLDSYFAILEFQK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1341g00011 357 PIRSF O-mtase 1 357 IPR016461 GO:0008168
Gabi1341g00011 357 Pfam O-methyltransferase domain 136 339 IPR001077 GO:0008171
Gabi1341g00011 357 Gene3D - 2 108 IPR036388 -
Gabi1341g00011 357 Gene3D Vaccinia Virus protein VP39 110 357 IPR029063 -
Gabi1341g00011 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 354 IPR029063 -
Gabi1341g00011 357 PANTHER O-METHYLTRANSFERASE 24 344 IPR016461 GO:0008168
Gabi1341g00011 357 SUPERFAMILY "Winged helix" DNA-binding domain 14 111 IPR036390 -
Gabi1341g00011 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 357 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1341g00011 Gabi-Chr1341 195729 198765 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1341g00011 6 357 Monolignol Biosynthesis Gene Families AT3G53140 61.173 2.45e-163 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1341g00011 - - ccaj:109819366 493.812