Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1341g00004 ATGGCCCAAATCAATTTCATTCCAGGGTTTCGGTTTCATCCCACTGATGTTGAGCTGGTTATGTACTTTCTGAAGAGAAAGATATTGGGGAAAAAATTCCCTGTCGATGTTATTGCTGAACTTGACATATACAAGTATGCTCCGTGGGATCTTCCAGATAAGTCTTTGCTGAGGAATGGTGATTTAGAATGGTACTTCTTTTGCCCTCGAGGAAGGAAATATTCCACTGGAGGGAGGATGAATCGGGCAACTGAAGATGGGTACTGGAAGACTACTGGGAAGGATAGATCAATCGAACACGAGAATCAAGTTGTGGCCATGATAAAAACCCTGGTGTTTCATAGGGGCCGACCACCTAAGGGAGACCGAACTGATTGGGTTATGCATGAATTCAGACTTGAAGACAAGGACCTGACTGACAAAGGCATTCCACAGCAGGACTCGTATGTGATTTGTAAGGTATTCCAAAAGGAAGGTCCTGGTCCCAGGAATGGTGCACAATATGGAAAACCATTTAATGAGGAAGACTGGGATAAAGAGGAAATATCTGTCTCTGTTCCTGCTATGTCTGCACAAGTTCCCATTCAACCTAGCACAAGTCATATTTCTGTTGAAAAACACATGCATTCCTCTACAACTGGATGCATTGGATTGACCTCTGTATCAAGTCCATCAGGACTTTCCTCTTACTTGACACATCCTTCAGCTCCAAGTAATCAAGTTGATGATGACATTTTACGTATGCTTGATTATTTCAAAGAAGATGATTACACATTGCCTGTGAATGAAAACAACGGAATTGAGGAGACCTTGACTGCTTGCTTGGATGTGATGAAGAAGGTGGTTTTTTCTGTGGCCAGAAAGATGAATGTCCTACAAACGAAGATGACTTGGGGCCTTTCGACCCCCCAAACTTCTTGGAATTGA 927 0.4283 MAQINFIPGFRFHPTDVELVMYFLKRKILGKKFPVDVIAELDIYKYAPWDLPDKSLLRNGDLEWYFFCPRGRKYSTGGRMNRATEDGYWKTTGKDRSIEHENQVVAMIKTLVFHRGRPPKGDRTDWVMHEFRLEDKDLTDKGIPQQDSYVICKVFQKEGPGPRNGAQYGKPFNEEDWDKEEISVSVPAMSAQVPIQPSTSHISVEKHMHSSTTGCIGLTSVSSPSGLSSYLTHPSAPSNQVDDDILRMLDYFKEDDYTLPVNENNGIEETLTACLDVMKKVVFSVARKMNVLQTKMTWGLSTPQTSWN 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1341g00004 308 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
Gabi1341g00004 308 FunFam Nac domain-containing protein 86 15 160 - -
Gabi1341g00004 308 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
Gabi1341g00004 308 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
Gabi1341g00004 308 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 210 - -
Gabi1341g00004 308 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1341g00004 Gabi-Chr1341 112053 116854 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1341g00004 1 264 NAC Transcription Factor Family AT5G09330 51.220 2.03e-92 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gabi1341g00004 NAM 1.7e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1341g00004 - - adu:107470479 372.859