Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1339g00002 ATGAGTTTTGAAGGTTATTTGCAATCCATGTCTGCTACCTGCAGTTTCTTGTTCTTCTTCTTTACTATTCTGTTCCTTTTGTTTTCTTTTCTCATCTTCATCACGAGGATGAAACCATGGTGTAACTGCGAGAATTGCAGGAGTTACTTGACCATGAGTTGGGTTCACAAGTTTGGCAATTTCTGCGATTGGTACACTCATCTTTTGAAAAACTCTTCAACCGGAACCATTCATATGCACGTGCTTCGAACCACCATCACTTCGAATCCAGAAAACGTTGAGTACATCCTCAAAACCAATTTCAACAACTACCCAAAAGGTAAACCTTTTTCCATCATCCTCGGCGATCTTTTGGGCCGAGGAATCTTCAATGTCGACGGCGATTCATGGAAGTTCCAACGCAAAATGGCAAGCTTAGAACTCGGAAGCGTGGCGATTCGCTCCTACGCTATGGAACTAGTAACCGATGAGATCCAAACGAGGTTAATTCCTCTCATGGCCATGGCTTCCGATGGAAGAAGAGTCTTGGACCTGCAAGACATTCTCCGACGATTCTCCTTCGACAACATTTGCAAATTCTCGTTCGGTCTCGACCCAGGTTGTCTCCTTCCTTCACTCCCAGTTTCCAACCTCGCCGTCGCCTTCGACCTGGCTTCAAAGCTCTCGGCGGAGCGAGCCATGACGGTGTCGCCGGCGATATGGAAGATGAAGCGGCTATTCAACATAGGATCGGAGAAGAAGCTGAAAGAAGCCATCAACGTAGTGAACGACTTAGCAGAAAAGATGATAAAGGAGAGAAGGGAAATGGAAATGGGTTTCGCTAAACGACAAGATCTTCTCTCGCGTTTCATGGATTCGGTAAACGACGACAAATACCTCAGAGACATCGTCGTAAGTTTCCTCTTAGCAGGTCGTGACACTGTTGCTGCCGCGTTAACCGGTTTTTTTGTTTTGCTATCAAAAAACCATGACGTGGAGGCGTTGATTCGGGAGGAGCTGGACCGGGTGGCTGGACCGGTTCACGGTTTTCCCACCTTTGAACAAACACGAGAAATGCATTACCTCAACGCTGCGGTTCACGAGAGCATGAGGCTTTTCCCTCCGGTTCAGTTCGATTCCAAGTACGCGACAGAGGATGACGTGTTACCAGATGGCACGTTTGTACGGAAGGGGAATCGGGTTACGTACCACCCGTATGCCATGGGTCGGATGGAGCAGATTTGGGGCCCCGATTGTCTCGAATTCAAGCCTGAGAGGTGGTTGCAAAACGGTGCGTTTGTGCCGGAGAATCCTTTCAAGTACCCTGTTTTTCAGGCTGGGGCAAGGGTTTGTTTAGGAAAGGATTTGGCTTTGGTGGAGATGAAGTCTGTGGTGGCGGCCTTAGTTCAACGGTTCGATATTCGGGTCGTTGGAGCGAATCAGGAGCCCCGGTTTTCCCCGGGTCTTACCGCCACTTTCAGAGGTGGCTTGCCGGTTCAAGTTTATGAAAGAAAATGCTGA 1500 0.4847 MSFEGYLQSMSATCSFLFFFFTILFLLFSFLIFITRMKPWCNCENCRSYLTMSWVHKFGNFCDWYTHLLKNSSTGTIHMHVLRTTITSNPENVEYILKTNFNNYPKGKPFSIILGDLLGRGIFNVDGDSWKFQRKMASLELGSVAIRSYAMELVTDEIQTRLIPLMAMASDGRRVLDLQDILRRFSFDNICKFSFGLDPGCLLPSLPVSNLAVAFDLASKLSAERAMTVSPAIWKMKRLFNIGSEKKLKEAINVVNDLAEKMIKERREMEMGFAKRQDLLSRFMDSVNDDKYLRDIVVSFLLAGRDTVAAALTGFFVLLSKNHDVEALIREELDRVAGPVHGFPTFEQTREMHYLNAAVHESMRLFPPVQFDSKYATEDDVLPDGTFVRKGNRVTYHPYAMGRMEQIWGPDCLEFKPERWLQNGAFVPENPFKYPVFQAGARVCLGKDLALVEMKSVVAALVQRFDIRVVGANQEPRFSPGLTATFRGGLPVQVYERKC 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1339g00002 499 Coils Coil 248 268 - -
Gabi1339g00002 499 Pfam Cytochrome P450 76 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1339g00002 499 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1339g00002 499 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1339g00002 499 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1339g00002 499 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1339g00002 499 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1339g00002 499 PANTHER CYTOCHROME P450 31 491 - -
Gabi1339g00002 499 SUPERFAMILY Cytochrome P450 54 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1339g00002 499 Gene3D Cytochrome P450 43 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1339g00002 499 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1339g00002 499 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1339g00002 499 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1339g00002 499 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1339g00002 499 CDD CYP86A 82 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1339g00002 Gabi-Chr1339 37142 38641 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1339g00002 31 497 Cytochrome P450 AT2G27690 62.474 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1339g00002 K20624 - gmx:100813091 781.941