Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1338g00004 ATGTTATCCGCTACAGAGGACAGGGAGGTAGTTCGTGTGTTAGAAGACTGTGAATGGAAGGAACTTAATGGGCTTTCACCTTCCAAGGTTGATATGCAGGGGATGAAAGATCCACTTTTGGACTCCAATTCCAATTTTTCCCAAATGAATGTGGAGCCTAATATCAGTTCGGACAACATATTGGTAACAGATTCTATCTTACCAGTTGATATGCCACAATCTCCTGATGTTGATGAAATTATTGTTCAACCTTATGTTGGAATGGAATTTGAATCATTGAAAAATGTTGAACATTTTTATAAATTATTTGCTAAAGCAAAGGGGTTTGGGGTCCGTATTCGCTCTAGTAAAAACAATTACGGCCTTTTTGTATGTTGTAAGCACGGTGAAAATAGCAAGAAGAAAAACGATGATCGGGGCAATTATAAGAAAAAGTCTTCAACTATTCGCTCGGGGTGTAAGGCATCACTTTCTGTGACAAAGGATAAGAATCGAGGCATATGGGTTATCAAATCTTTTGATAATAATCATAATCATATCATGGCTAGTCCTAAGAGTGTATCTTATTTGAGGTGTCATAAAAAAATGAATGGTGTGGCAAGAAAGTTTGTTGAAAAGTTTAATGATGAAGGTATGCCTACCGGAAAGGTTGCTGCAATGTTTAGTGGCAATGATTTAGCTTTTTCTAATCGGGATTATTGGAATCATTTGAGAAATCTTGGAAGGAAGAATTTGGATGTTGGAGATGCACTAGCTGTTTTCAATTACTGCAAACAAAAGCAATCTCAAAATCCTGATTTTTTCTATTCTATACAATGTGATGCTGATGATAGAATGATAAACTTCTTTTGGGTGGATGCTAGATCAAGGTATGCTTATCAACAGTTTGGAGATGTAATCACTTTTGACACTACATATAGAACTAACAAATATAGCATGTCGTTCGCCCCATTTACTGGATTAAACCATCATCTTCAATCAATTTTATTTGGTTGTGCCTTATTAAGAGATGAAACCGAGAAATCTTTTATATGGTTATTTGAAACTTGGCTTGAGGCAATGAATGGGAAAAAGCCTATTTCCATAATAACTGATCAAGATTTAGCTATTGGAGCTATTGTGGCCAAGACTCAATTTAGCAAACTTTCTGATTTGGCTAAAAGATCAGAATACGCATACAAGTATATTGTGACAGAACTTGATCGTATTTATGATGTGGCCAGTACAATGGAAACAGAAATGCTTGATGTCAATGAAGCTCCTTTAGAGTTTGAGTTAACAAAATTTGACATGTGA 1296 0.3565 MLSATEDREVVRVLEDCEWKELNGLSPSKVDMQGMKDPLLDSNSNFSQMNVEPNISSDNILVTDSILPVDMPQSPDVDEIIVQPYVGMEFESLKNVEHFYKLFAKAKGFGVRIRSSKNNYGLFVCCKHGENSKKKNDDRGNYKKKSSTIRSGCKASLSVTKDKNRGIWVIKSFDNNHNHIMASPKSVSYLRCHKKMNGVARKFVEKFNDEGMPTGKVAAMFSGNDLAFSNRDYWNHLRNLGRKNLDVGDALAVFNYCKQKQSQNPDFFYSIQCDADDRMINFFWVDARSRYAYQQFGDVITFDTTYRTNKYSMSFAPFTGLNHHLQSILFGCALLRDETEKSFIWLFETWLEAMNGKKPISIITDQDLAIGAIVAKTQFSKLSDLAKRSEYAYKYIVTELDRIYDVASTMETEMLDVNEAPLEFELTKFDM 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1338g00004 431 Pfam MULE transposase domain 299 376 IPR018289 -
Gabi1338g00004 431 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 80 373 IPR031052 GO:0006355
Gabi1338g00004 431 Pfam FAR1 DNA-binding domain 98 181 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1338g00004 Gabi-Chr1338 76798 79765 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi1338g00004 MULE 2.4e-19 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1338g00004 - - vvo:131633311 447.203