Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1332g00007 ATGATTAGGGAGCCTATTGGACCTTCTCCTACCAAGTCATGCTTGTTAATGATTTTTCACTTGGTTTCCTCATCAGAGAATAAAGACTTAATCTCACAAAGATTTGTGGAATTGGGTTTGGTTTCGCTCGTGCTTGAGGCTATTGTTGATGCTGAAAAAGGGATCTGCGAGAAAGGTTTGGGGGTGTTGCATTGCATTTGTCAGGGAAAACAAGGGATGGAAATAGCAAAGTCAAATGCTCTGACTTTGCCTCTTGTGATTAAGAAGCTTTTGAGGGTGTCAGAGTTGAGTTCTACTTTTGCAGTCTCTATTCTTTGGAAGCTATGTGACAAGACCGACGAAGGGATCTTGATTGAGGCACTTCAAGTGGGTGTCTTTCAGAAACTCCTTGTTCTGTTGCAGGTGGGTTGTGGTGAGGACACAAAGGAGAAGGCTACCGAGTTGTTGAGGTTGTTGAATTGTTACAGGAGCAAAGCAGATTGTGTTGATTCCTCATTGGATTTCAAGCACCTTAAGAAGCCCTTCTGA 528 0.4299 MIREPIGPSPTKSCLLMIFHLVSSSENKDLISQRFVELGLVSLVLEAIVDAEKGICEKGLGVLHCICQGKQGMEIAKSNALTLPLVIKKLLRVSELSSTFAVSILWKLCDKTDEGILIEALQVGVFQKLLVLLQVGCGEDTKEKATELLRLLNCYRSKADCVDSSLDFKHLKKPF 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1332g00007 175 Gene3D - 7 164 IPR011989 -
Gabi1332g00007 175 PANTHER WDSAM1 PROTEIN 8 162 IPR045185 GO:0061630
Gabi1332g00007 175 SUPERFAMILY ARM repeat 13 154 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1332g00007 Gabi-Chr1332 129878 130405 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1332g00007 13 175 U-box Gene Family AT1G66160 44.910 1.00e-41 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1332g00007 - - gmx:100795913 257.299