Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1332g00006 ATGGATGTGGAACTTCCAGCATCATCTGACAATGAATCACAACAACAAAAGTTCACTCTTCCTGTGGATTCTGAACACAAGGCCACTGAATTCAGATTATTTTCCTTAGCTAAACCCCACATGCGTGCTTTCCATCTATCATGGGTCTCTTTCTTTTCATGCTTTGTATCTAGTTTTGCAGCACCACCCCTCATTCCAATAATTCGTGACAACCTCAATCTCACAGCTACTGACATAGGAAATGCTGGGGTTGCATCAGTTTCAGGTGCTGTTTTTGCAAGAATTGCTATGGGAACTGCTTGTGACTTGGTTGGACCAAGACTTGCCTCTGCATCTCTCATATTACTCACAGCACCAGCAGTGTACTTCACTTCCATTATCTCTTCAGCTACCTCCTACCTCCTTGTTCGTTTCTTCACTGGCTTTTCCTTAGCCACCTTTGTCTCCACACAGTTTTGGATGAGTTCTATGTTTTCTGCTCCGGTGGTTGGTTCAGCCAATGGATTTTCAGGTGGATGGGGAAACCTTGGAGGAGGGGCCACACAACTCATCATGCCCCTTGTGTTTTCCCTCATCCGTGACATTGGTGCAGCACAATTCACAGCATGGAGAATAGCATTCTTTGTTCCTGCTTTGTTCCAAATGCTCACAGCTTTTTCCATATTGATGTTTGGTCAAGATATGCCAGATGGGAATTTCCATCGCCTGAAGAAGTCAGGGGAAAAACCAAAAGATGAATTTTCAAGAGTTTTGTATCATGGGATTACAAATTATAGAGGGTGGATTTTAGCATTAACTTATGGTTATTGCTTTGGGGTAGAGCTTACCATAGACAACATCATAGCTGAATATTTCTATGATAGATTTAATCTGAAACTTCACACAGCTGGAATCATTGCTGCATGCTTTGGTTTAGCTAATGTGTTTTCTAGACCTGGAGGGGGTTATATATCTGATGCAATGGCTAAGAGGTTTGGAATGAAAGGTAGGTTATGGGCCTTATGGGTGTGTCAAACCTTGGCTGGTGTGTTCTGCATAATCCTTGGCATGGTTGGATCTTTAAGTGTATCCATTGTTGTTATGATCATATTCTCTGTGTTTGTCCAAGCTGCATGTGGGATGACCTTTGGAATTGTTCCTTTTGTCTCAAGAAGGTCATTAGGGGTCATATCTGGAATGACAGGTGGAGGAGGCAATGTGGGTGCAGTGGTGACACAACTAATTTTCTTCAAAGGATCCAAGTTTTCAAAAGAAAGGGGAATAACTCTAATGGGTGTGATGATCATAATATGCACCCTGCCAATGTGCTTAATATACTTTCCACAATGGGGTGGGATGTTTTTTGGTCCATCATCTGAAAGGGTCACAGAAGAAGACTACTACTTGGCTGAGTGGAACTCAAAGGAGCAGGAGAAAGGTTCCCATCATGCAAGCTTGAAATTTGCTGATAACAGCAGAAGTGAAAGAGGCCAAAAACTCAATACTTCAACCAGGCCCTCTGAGGAAATCACACCACCACATGTTTGA 1527 0.4263 MDVELPASSDNESQQQKFTLPVDSEHKATEFRLFSLAKPHMRAFHLSWVSFFSCFVSSFAAPPLIPIIRDNLNLTATDIGNAGVASVSGAVFARIAMGTACDLVGPRLASASLILLTAPAVYFTSIISSATSYLLVRFFTGFSLATFVSTQFWMSSMFSAPVVGSANGFSGGWGNLGGGATQLIMPLVFSLIRDIGAAQFTAWRIAFFVPALFQMLTAFSILMFGQDMPDGNFHRLKKSGEKPKDEFSRVLYHGITNYRGWILALTYGYCFGVELTIDNIIAEYFYDRFNLKLHTAGIIAACFGLANVFSRPGGGYISDAMAKRFGMKGRLWALWVCQTLAGVFCIILGMVGSLSVSIVVMIIFSVFVQAACGMTFGIVPFVSRRSLGVISGMTGGGGNVGAVVTQLIFFKGSKFSKERGITLMGVMIIICTLPMCLIYFPQWGGMFFGPSSERVTEEDYYLAEWNSKEQEKGSHHASLKFADNSRSERGQKLNTSTRPSEEITPPHV 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1332g00006 508 MobiDBLite consensus disorder prediction 468 508 - -
Gabi1332g00006 508 MobiDBLite consensus disorder prediction 488 502 - -
Gabi1332g00006 508 CDD MFS_NRT2_like 44 437 IPR044772 GO:0015112
Gabi1332g00006 508 FunFam High affinity nitrate transporter 2.5 36 232 - -
Gabi1332g00006 508 Gene3D MFS general substrate transporter like domains 248 444 IPR036259 -
Gabi1332g00006 508 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 10 492 IPR044772 GO:0015112
Gabi1332g00006 508 FunFam Nitrate transporter 2.1 244 445 - -
Gabi1332g00006 508 Pfam Major Facilitator Superfamily 49 404 IPR011701 GO:0022857|GO:0055085
Gabi1332g00006 508 SUPERFAMILY MFS general substrate transporter 29 439 IPR036259 -
Gabi1332g00006 508 Gene3D MFS general substrate transporter like domains 36 233 IPR036259 -
Gabi1332g00006 508 MobiDBLite consensus disorder prediction 468 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1332g00006 Gabi-Chr1332 111156 113334 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1332g00006 16 499 Inorganic Solute Cotransporters AT1G12940 73.760 0.0 757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1332g00006 K02575 - gmx:100787888 892.108