Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi132g00001 ATGGCATCTTCAGACACATCTTCCAACAAAACCACCAAACAACAACAACAACAGCTCCCATTGAAATCAATCCCAGGAAGCTATGGCCTTCCATTTTTTGGACCAATCAGGGACAGACACGATTTCTTCTACCACCAAGGCCAAGACAAGTTCTTCGCCACAAGAATCCAAAAACACAATTCCACAGTTATAAGAACCAACATGCCACCAGGATCCTTCATATCCTCCGATCCAAGAGTCATAGCACTCTTGGACGGTGCTTCCTTCCCTATCCTCTTTGACAACAACAAAGTCGAGAAACTCAACGTCCTTGACGGCACCTTCATGCCCACAACTAAATTCACCGGCGATTACCGCGTTTGTGCATACCTCGACACAACCGAACCTAACCATGCTGTTCTCAAACGCTTCTTCCTCAACATACTCCAATCTCGAAAAGACTCTTTTGTCCCTCTCTTCCGCAACCTTATTGCTGAGTCATTCGCTGAGCTTGAGGACCAGTTATCTGGTAAGAGCGGCGAGGCTGATTTCAACGCCGCCATCGGCAAAGCTTCCTTCAACTTCATGTTTCGTCTTCTATGTAACAACAAGGACCCATTAGAGACGAAGCTTGGTTCCAATGGTCCCAAATTCTTCGACATGTGGTTGCTCTTTCAGCTTGCACCACTTGCAACCCTAGGCCTCCCTAAAATCTTCAACTACATCGAGGATTTCTTGATTCGCACGGTTCCTTTCCCAGCGTGTCTCGTGAAACCAACTTACAATAAGCTCTACGAGGTATTTTTTGACACGGCGGGGACGGTGCTGGACGAGGCGGAGAAGGCGGGGATAAATAGAATGGAAGCATGCCACAACCTCGTTTTCATGGCGGGTTTCAACGCATACGGTGGGTTGAAGAACCAGTTCCCAGTTTTGATGAAGTGGGTGGGTTTGGGTGGTGAGAAGCTACACAAGGAGCTCGCGAATGAGATAAGAAGCGTGGTTAAGGAACAAGGTGGGGTCACTCTCGGTGCGTTGGAGAGGATGAGTTTGGTGAAATCGGTTGTGTATGAAGCTATGAGGATCGAGCCTGCGGTTCCGTACCAGTACGGAAGGGCGAGGGAGGACTTGGTCGTGGAGAGCCACGATGCTGCATTTGTGATCCAGAAAGGTGAGATGATTTTTGGGTACCAACCGTTTGCGACCAAGGATCCTAGGATTTTCGAGGATGCTGAGGAATTCGTGGCGCGTAGGTTTGTGGGTAATGATGGTGAGAGGATGCTGAAGCACGTGCTTTGGTCGAATGGGCGTGAGACGGAGGAGCCGTCGACGGATAATAAACAGTGTCCAGGGAAGAATCTGGTGGTGCTGCTTTGTAGGTTGTTGTTGGTTGAGTTCTTCTTGCGTTACGATACGTTTGATTTTGAGTACAAAACCGTTGTTTTGGGTCCCTATGTTACCATCAAGTCTCTCACTAAGACATCCATCTTCTGA 1473 0.484 MASSDTSSNKTTKQQQQQLPLKSIPGSYGLPFFGPIRDRHDFFYHQGQDKFFATRIQKHNSTVIRTNMPPGSFISSDPRVIALLDGASFPILFDNNKVEKLNVLDGTFMPTTKFTGDYRVCAYLDTTEPNHAVLKRFFLNILQSRKDSFVPLFRNLIAESFAELEDQLSGKSGEADFNAAIGKASFNFMFRLLCNNKDPLETKLGSNGPKFFDMWLLFQLAPLATLGLPKIFNYIEDFLIRTVPFPACLVKPTYNKLYEVFFDTAGTVLDEAEKAGINRMEACHNLVFMAGFNAYGGLKNQFPVLMKWVGLGGEKLHKELANEIRSVVKEQGGVTLGALERMSLVKSVVYEAMRIEPAVPYQYGRAREDLVVESHDAAFVIQKGEMIFGYQPFATKDPRIFEDAEEFVARRFVGNDGERMLKHVLWSNGRETEEPSTDNKQCPGKNLVVLLCRLLLVEFFLRYDTFDFEYKTVVLGPYVTIKSLTKTSIF 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi132g00001 490 PRINTS E-class P450 group IV signature 342 358 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi132g00001 490 PRINTS E-class P450 group IV signature 442 460 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi132g00001 490 PRINTS E-class P450 group IV signature 379 393 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi132g00001 490 PRINTS E-class P450 group IV signature 395 413 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi132g00001 490 MobiDBLite consensus disorder prediction 1 26 - -
Gabi132g00001 490 Pfam Cytochrome P450 317 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi132g00001 490 FunFam Allene oxide synthase, chloroplastic 19 489 - -
Gabi132g00001 490 SUPERFAMILY Cytochrome P450 20 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi132g00001 490 CDD CYP74 54 482 - -
Gabi132g00001 490 Gene3D Cytochrome P450 19 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi132g00001 490 PANTHER CYTOCHROME P450 26 17 467 - -
Gabi132g00001 490 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi132g00001 Gabi-Chr132 34709 38931 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi132g00001 11 488 Cytochrome P450 AT5G42650 51.566 9.66e-178 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi132g00001 K01723 - gmx:100801764 744.191