Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1320g00001 ATGGACACCAGTCTTTACATAGCAAAGAAAACACACTACAATATTTTCCCTAACCAGCAATACATTGATCATGAGGCAGCCACCATAGACATGCACCACATCAATCATCCCCAAAATAGTAGTCACACATCCACAAGCCATTCTTCTGATTCGGGAGGAACTTGTACTAGTGATGAAGGTAAATTGGCTTCCAAGCTTCTTAAAGAGTGTGCTAAAGCAATCTCTGATAAAGACTCTGGCAAAATCCACCATCTTCTATGGATGTTAAACGAGCTTGCATCCCCTTATGGAAACTGTGAGCAAAAATTAGCCTCCTACTTCTTGCAAGCTCTATTTTGTAAGGCCACAGAGTGTGGTCAAAGGTGCTACAAGACCCTTTCCTCTGTAGCTGAGAAAAACCACTCCTTCAATTCAGCTAGAAAGTTAATACTCAAGTTTCAAGAGGTAAGCCCTTGGACAACTTTTGGACACGTGGCATCAAATGGTGCCATTTTAGAAGCCTTCGAAGGCGAGACAACACTACATATTATTGATATAAGCAACACCCTTTGCACTCAATGGCCTACTTTGTTGGAAGCCTTGGCTACAAGAAATGATGAAACCCCTAACTTGAAGCTCACAGTTGTAGCTATAACGGGTAGCATAGTAGGAGTTGTGACGGTCGTTGAAGAGGAAGGTGATTTTTGCAGCTCAAGAAATGACTTCTTCAAGAGCTTTGAAGAGTGTCTTAGGTTTTACACCCTTTACTTTGAGATGCAAGAGGAAAGCTTTCCCTCAATCAGTAATGAAAGATTGATGCTAGAGAGGGAGTGCTCGAGAAACATAATTAGGGTTTTGGCTTGCAATGATGATGATGAATTTGGGTATGATATTTGTGAGAGAAGGGAGAGAGGAACACAATGGTCTTGGAGGCTTAAGGAGGAATTTTTCCCAATTGGGTTCAGTGATGATGTTGTGGATGATGTCAAGGCATTACTCAAAAGGTACCGTCCTGGGTGGTCCCTTGTGGTGCCACAAGGAAATGATCATCTTTCAGGAATTTACTTGACATGGAAGGAGGAACCGGTTGTTTGGGCTTCAGTATGGAAACCCTAA 1095 0.4228 MDTSLYIAKKTHYNIFPNQQYIDHEAATIDMHHINHPQNSSHTSTSHSSDSGGTCTSDEGKLASKLLKECAKAISDKDSGKIHHLLWMLNELASPYGNCEQKLASYFLQALFCKATECGQRCYKTLSSVAEKNHSFNSARKLILKFQEVSPWTTFGHVASNGAILEAFEGETTLHIIDISNTLCTQWPTLLEALATRNDETPNLKLTVVAITGSIVGVVTVVEEEGDFCSSRNDFFKSFEECLRFYTLYFEMQEESFPSISNERLMLERECSRNIIRVLACNDDDEFGYDICERRERGTQWSWRLKEEFFPIGFSDDVVDDVKALLKRYRPGWSLVVPQGNDHLSGIYLTWKEEPVVWASVWKP 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1320g00001 364 MobiDBLite consensus disorder prediction 35 56 - -
Gabi1320g00001 364 ProSiteProfiles GRAS family profile. 54 363 IPR005202 -
Gabi1320g00001 364 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 218 353 IPR005202 -
Gabi1320g00001 364 Pfam GRAS domain family 65 210 IPR005202 -
Gabi1320g00001 364 Pfam GRAS domain family 218 363 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1320g00001 Gabi-Chr1320 1063 2157 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1320g00001 218 364 GRAS Transcription Factor Family AT4G37650 47.403 2.00e-36 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi1320g00001 GRAS 4.1e-21 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1320g00001 - - cit:102610900 290.812