Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1313g00009 ATGGTAAATAGTCCAAGAAACATGAAGATAGGTGACACAAACACCCCAACTTCCTCTCCTCCATTTTCTCACTCTTGTACTTCATCATCTTCCCCTCCACAATCTCTATCTCCCCAAGTTGTTATGAGCCCTTGCGCTGCTTGCAAGATCTTGAGGCGAAGATGTGCAGAGAAATGTGTGTTGGCGCCTTATTTCCCTCCCACTGAACCTGCCAAGTTTACAACTGCACACAGAGTCTTCGGAGCCAGCAACATCATCAAGTTCTTACAGGAACTTCCAGAGTCTCAACGAGCTGATGCAGTGACCAGCATGGTTTACGAGGCTAGTGCAAGAGTAAGAGACCCTGTATACGGTTGTGCAGGTGCAATTTGCCAGCTCCAGAAGCAAGTTAACGAGCTTCAAGCACAATTAGCAAAAGCACAAGGAATCACAACAACAATCAGTGGACAACTTCATTTCAAGTCCTCCTCACAGCGGCGGCTATCTAAACAATATGAACTTCTTTGA 507 0.4596 MVNSPRNMKIGDTNTPTSSPPFSHSCTSSSSPPQSLSPQVVMSPCAACKILRRRCAEKCVLAPYFPPTEPAKFTTAHRVFGASNIIKFLQELPESQRADAVTSMVYEASARVRDPVYGCAGAICQLQKQVNELQAQLAKAQGITTTISGQLHFKSSSQRRLSKQYELL 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1313g00009 168 ProSiteProfiles LOB domain profile. 43 144 IPR004883 -
Gabi1313g00009 168 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 43 150 - -
Gabi1313g00009 168 Pfam Lateral organ boundaries (LOB) domain 44 141 IPR004883 -
Gabi1313g00009 168 MobiDBLite consensus disorder prediction 1 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1313g00009 Gabi-Chr1313 118716 120409 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1313g00009 39 141 AS2 family AT1G07900 87.379 2.48e-65 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gabi1313g00009 LOB 1.2e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1313g00009 - - gmx:100789504 208.379