Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1313g00002 ATGAACTCCTGGAATTCAAGATTGTACTGCAGGAGGCGTGTGGTTTTCTTGTTTCAAGTCATGGCCGTGCTGTTTCAGAAGAGAGAGAACTACAGGAAAATGTATACTCCAATGATGACTATGTCGAGACAGCATCTTTGCTTGAACAGGTTCCTTGAAATGAGATCTCAACCGTCAAATCCTTCTGGTTTAAGATTTATCTGTGGGATAATTTGTAAATCCAAGATTCTGAGGTTTGAAAGGATGTTGTTTCGTGCTACACGAGGAAATATGCTTTTCAATCAAGCACCAGCTGATGAACAAATCATGGATCCTATTTCAACTGAGATGATAGAGAAAACAGTGTTTGTTGTGTTTTTCTCTGGGGAGCAGGCAAGAACGAAGATTCTGAAAATTTGTGAGGCATTTGGTGCAAATTGTTACCCTGTTCCTGAAGATATAACTAAGCAGAGGCAAATAACTAGAGAGGTTTCATCTCGTCTTACTGACCTAGAGGCAACTTTGGATGCTGGGATTAGGCACCGGAACAAGGCTTTAGCTTCTGTAGGGGACCATCTAGCAAAATGGATGAACATGGTAAGAAGAGAGAAGGCTGTCTATGATACACTGAACATGTTAAATTTTGATGTCACAAAAAAATGTCTTGTCGGAGAGGGCTGGTGCCCTATGTTTGCAAAAACACAGCTGCAGGAGGCACTGCAACGTGCAACTTTTGATAGCAATTCTCAAGTTGGCATAATCTTCCATCAAATGGATGCGGTAGAATCACCACCTACATATTTTAGGACCAACACTTTCACCAGTCCATATCAGGAAATTGTTGATGCATATGGTGTTGCAAGATACCAAGAAGCAAATCCTGCAGTTTACACAACTATTATATTCCCCTTCCTATTTGCTTTGATGTTTGGGGACTGGGGTCATGGAATTTGCCTGTTGCTGGGAGCATTAGTTCTCATAGCACGTGAAAACAAGCTCAGCACGCAGAAACTTGGAAGCTTTATGGAGATGCTATTTGGCGGGCGCTATGTGATTCTTTTGATGTCACTATTTTCAATATATTGTGGGTTAATCTACAATGAATTCTTTTCTGTTCCTTTTCACATATTTGGTTCGTCAGCTTACAAATGCCGAGATAGCTCATGCAGGGATGCACATACTATTGGCTTAGTCAAATACCAAGATCCATACCCATTTGGTGTGGATCCCAGCTGGCGTGGAAGTCGTTCAGAATTGCCTTTTCTGAACTCTATGAAGATGAAGATGTCCATTCTTTTTGGTGTGGCACATATGAACTTAGGAATTATATTAAGTTATTTCAATGCTCGTTTCTTTGGAAACTCACTGGATATAAGGTACCAGTTTGTGCCACAGATTATTTTCCTCAACAGTCTATTCGGGTATCTTTCCCTTCTCATTGTTGTTAAATGGTGTACTGGCTCTCGAGCAGACCTTTATCATGTAATGATATACATGTTTTTAAGCCCCACGGACAATCTTGGTGAGAATCAGTTGTTCTGGGGTCAAAGACCACTTCAAATTGTGCTATTGCTTTTGGCTATAGTTGCAGTTCCGTGGATGCTCTTTCCGAAACCTTTTATACTAAAGAAGCTTCATACTGAGAGATTCCAAGGTCGTAGTTATGGTATACTAAATTCCTCTGAGATGGATCTTGAGGTGGAGCCAGATTCTGCCAGGCAACATCATCATGAAGAATTCAATTTCAGTGAGGTTTTTGTTCATCAAATGATCCACTCCATTGAGTTTGTTCTAGGTTCAGTTTCAAATACTGCATCATATCTTCGACTTTGGGCATTAAGTTTGGCACACTCGGAACTTTCTACTGTTTTCTATGAGAAAGTTCTGCTTCTTGCTTGGGGGTATGACAATCTTGTCATTCGGTTAGTGGGGCTAGCTGTTTTTGCCTTTGCGACTGCCTTTATACTACTTATGATGGAGAGTCTTAGTGCTTTTCTTCATGCCCTGCGGCTTCACTGGGTAGAATTTCAAAATAAATTTTACCATGGTGATGGCTACAAGTTCAGGCCTTTTTCATTTGCCTCCTTAACAGAGGATGATGATTGA 2085 0.4072 MNSWNSRLYCRRRVVFLFQVMAVLFQKRENYRKMYTPMMTMSRQHLCLNRFLEMRSQPSNPSGLRFICGIICKSKILRFERMLFRATRGNMLFNQAPADEQIMDPISTEMIEKTVFVVFFSGEQARTKILKICEAFGANCYPVPEDITKQRQITREVSSRLTDLEATLDAGIRHRNKALASVGDHLAKWMNMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPMFAKTQLQEALQRATFDSNSQVGIIFHQMDAVESPPTYFRTNTFTSPYQEIVDAYGVARYQEANPAVYTTIIFPFLFALMFGDWGHGICLLLGALVLIARENKLSTQKLGSFMEMLFGGRYVILLMSLFSIYCGLIYNEFFSVPFHIFGSSAYKCRDSSCRDAHTIGLVKYQDPYPFGVDPSWRGSRSELPFLNSMKMKMSILFGVAHMNLGIILSYFNARFFGNSLDIRYQFVPQIIFLNSLFGYLSLLIVVKWCTGSRADLYHVMIYMFLSPTDNLGENQLFWGQRPLQIVLLLLAIVAVPWMLFPKPFILKKLHTERFQGRSYGILNSSEMDLEVEPDSARQHHHEEFNFSEVFVHQMIHSIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVIRLVGLAVFAFATAFILLMMESLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFASLTEDDD 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1313g00002 694 PANTHER VACUOLAR PROTON ATPASES 34 693 IPR002490 GO:0033179|GO:0046961|GO:1902600
Gabi1313g00002 694 PIRSF ATP6V0A1 13 694 IPR026028 GO:0000220|GO:0046961
Gabi1313g00002 694 Pfam V-type ATPase 116kDa subunit family 54 686 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1313g00002 Gabi-Chr1313 8066 19950 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1313g00002 53 687 Primary Pumps ATPases(2) AT2G28520 82.575 0.0 1095
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1313g00002 K02154 - gmx:100776037 1231.08