Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1313g00001 ATGTTTTCCGGGAAAATGGAACAGTTCATAGACAACATGCCGCAGATGGATCTGATGCGATCCGAGAAGATGACCTTCGTTCAGCTCATCATCCCTGCAGAGTCTGCTCACCGCGCCATCTCCTATTTGGGCGAACTCGGCCTCCTCCAATTCCGAGACTTGAATGCTGAAAAAAGCCCCTTCCAGAGAACGTTTGTTAATCAGGTAAAGCGATGTGCGGAAATGTCAAGAAAGCTACGTTTCTTCAAGGATCAAATCAATAAAGCTGGTCTAATGTCTTCTTGTCGTACTGTACTGCAACCAGACATTGACTTGGAGGATTTAGAGGTTCAACTTGCTGAGCATGAACATGAGCTAATTGAAATGAACTCTAATAGCGACAAGCTTCAGCAATCATATAATGAACTCCTGGAATTCAAGATTGTACTGCAGGAGGCGTGTGGTTTTCTTGTTTCAAGTCATGGCCGTGCTGTTTCAGAAGAGAGAGAACTACAGGAAAATGTATACTCCAATGATGACTATGTCGAGACAGCATCTTTGCTTGAACAGGAAATGAGATCTCAACCGTCAAATCCTTCTGGTTTAAGATTTATCTGTGGGATAATTTGTAAATCCAAGATTCTGAGGTTTGAAAGGATGTTGTTTCGTGCTACACGAGGAAATATGCTTTTCAATCAAGCACCAGCTGATGAACAAATCATGGATCCTATTTCAACTGAGATGATAGAGAAAACAGTGTTTGTTGTGTTTTTCTCTGGGGAGCAGGCAAGAACGAAGATTCTGAAAATTTGTGAGGCATTTGGTGCAAATTGTTACCCTGTTCCTGAAGATATAACTAAGCAGAGGCAAATAACTAGAGAGGTTTCATCTCGTCTTACTGACCTAGAGGCAACTTTGGATGCTGGGATTAGGCACCGGAACAAGGCTTTAGCTTCTGTAGGGGACCATCTAGCAAAATGGATGAACATGGTAAGAAGAGAGAAGGCTGTCTATGATACACTGAACATGTTAAATTTTGATGTCACAAAAAAATGTCTTGTCGGAGAGGGCTGGTGCCCTATGTTTGCAAAAACACAGCTGCAGGAGGCACTGCAACGTGCAACTTTTGATAGCAATTCTCAAGTTGGCATAATCTTCCATCAAATGGATGCGGTAGAATCACCACCTACATATTTTAGGACCAACACTTTCACCAGTCCATATCAGGAAATTGTTGATGCATATGGTGTTGCAAGATACCAAGAAGCAAATCCTGCAGTTTACACAACTATTATATTCCCCTTCCTATTTGCTTTGATGTTTGGGGACTGGGGTCATGGAATTTGCCTGTTGCTGGGAGCATTAGTTCTCATAGCACGTGAAAACAAGCTCAGCACGCAGAAACTTGGAAGCTTTATGGAGATGCTATTTGGCGGGCGCTATGTGATTCTTTTGATGTCACTATTTTCAATATATTGTGGGTTAATCTACAATGAATTCTTTTCTGTTCCTTTTCACATATTTGGTTCGTCAGCTTACAAATGCCGAGATAGCTCATGCAGGGATGCACATACTATTGGCTTAGTCAAATACCAAGATCCATACCCATTTGGTGTGGATCCCAGCTGGCGTGGAAGTCGTTCAGAATTGCCTTTTCTGAACTCTATGAAGATGAAGATGTCCATTCTTTTTGGTGTGGCACATATGAACTTAGGAATTATATTAAGTTATTTCAATGCTCGTTTCTTTGGAAACTCACTGGATATAAGGTACCAGTTTGTGCCACAGATTATTTTCCTCAACAGTCTATTCGGGTATCTTTCCCTTCTCATTGTTGTTAAATGGTGTACTGGCTCTCGAGCAGACCTTTATCATGTAATGATATACATGTTTTTAAGCCCCACGGACAATCTTGGTGAGAATCAGTTGTTCTGGGGTCAAAGACCACTTCAAATTGTGCTATTGCTTTTGGCTATAGTTGCAGTTCCGTGGATGCTCTTTCCGAAACCTTTTATACTAAAGAAGCTTCATACTGAGAGATTCCAAGGTCGTAGTTATGGTATACTAAATTCCTCTGAGATGGATCTTGAGGTGGAGCCAGATTCTGCCAGGCAACATCATCATGAAGAATTCAATTTCAGTGAGGTTTTTGTTCATCAAATGATCCACTCCATTGAGTTTGTTCTAGGTTCAGTTTCAAATACTGCATCATATCTTCGACTTTGGGCATTAAGTTTGGCACACTCGGAACTTTCTACTGTTTTCTATGAGAAAGTTCTGCTTCTTGCTTGGGGGTATGACAATCTTGTCATTCGGTTAGTGGGGCTAGCTGTTTTTGCCTTTGCGACTGCCTTTATACTACTTATGATGGAGAGTCTTAGTGCTTTTCTTCATGCCCTGCGGCTTCACTGGGTAGAATTTCAAAATAAATTTTACCATGGTGATGGCTACAAGTTCAGGCCTTTTTCATTTGCCTCCTTAACAGAGGATGATGATTGA 2478 0.4132 MFSGKMEQFIDNMPQMDLMRSEKMTFVQLIIPAESAHRAISYLGELGLLQFRDLNAEKSPFQRTFVNQVKRCAEMSRKLRFFKDQINKAGLMSSCRTVLQPDIDLEDLEVQLAEHEHELIEMNSNSDKLQQSYNELLEFKIVLQEACGFLVSSHGRAVSEERELQENVYSNDDYVETASLLEQEMRSQPSNPSGLRFICGIICKSKILRFERMLFRATRGNMLFNQAPADEQIMDPISTEMIEKTVFVVFFSGEQARTKILKICEAFGANCYPVPEDITKQRQITREVSSRLTDLEATLDAGIRHRNKALASVGDHLAKWMNMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPMFAKTQLQEALQRATFDSNSQVGIIFHQMDAVESPPTYFRTNTFTSPYQEIVDAYGVARYQEANPAVYTTIIFPFLFALMFGDWGHGICLLLGALVLIARENKLSTQKLGSFMEMLFGGRYVILLMSLFSIYCGLIYNEFFSVPFHIFGSSAYKCRDSSCRDAHTIGLVKYQDPYPFGVDPSWRGSRSELPFLNSMKMKMSILFGVAHMNLGIILSYFNARFFGNSLDIRYQFVPQIIFLNSLFGYLSLLIVVKWCTGSRADLYHVMIYMFLSPTDNLGENQLFWGQRPLQIVLLLLAIVAVPWMLFPKPFILKKLHTERFQGRSYGILNSSEMDLEVEPDSARQHHHEEFNFSEVFVHQMIHSIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVIRLVGLAVFAFATAFILLMMESLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFASLTEDDD 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1313g00001 825 PIRSF ATP6V0A1 14 825 IPR026028 GO:0000220|GO:0046961
Gabi1313g00001 825 Coils Coil 105 132 - -
Gabi1313g00001 825 PANTHER VACUOLAR PROTON ATPASES 18 824 IPR002490 GO:0033179|GO:0046961|GO:1902600
Gabi1313g00001 825 Pfam V-type ATPase 116kDa subunit family 42 817 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1313g00001 Gabi-Chr1313 8066 22237 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1313g00001 6 818 Primary Pumps ATPases(2) AT2G28520 80.982 0.0 1375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1313g00001 K02154 - gmx:100776037 1544.64