Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1304g00015 ATGGCGTTTTTGAAGCTTTTCTCTCTCTACATTTCCATGTCCTTCATCTTCTTCTTCATCTTCTTTTTCTCCTCCTGTTTCTGCAAAGCTAGTACCTCAACAAAGTCTTTGTCTTCATCTACTTCCTCTGATGTTGAGCTTCTCTTGGGAAAAATCAGAGGTTCATTGCAGGGTGACAATGAAAACCTTGTTTTGTCTTCATGGAACTCCTCAATACCACTATGCCAATGGAGAGGCCTCAAGTGGGTGCTCTCTAATGGCTCTCCTTTGTCATGCAGTGACTTGTCTTCACCACAATGGACCAATCTTTCACTTTACAAGGAACCTTCTGTGCACTTGCTTTCTCTTCAGCTTCCATCTGCCAATCTCTCTGGTTCACTCCCCAGAGAGCTTGGGGAGTTCCCTATGCTTCAAAGTCTCTATCTTAACATCAATTCATTGAAAGGAACCATCCCTCTTGAGCTTGGTTATAGCTCCTCTCTCTCTGACATTGATTTGGGTGACAATATGCTGAGTGGGACTCTTCCACCATCCATATGGAATTTGTGTGACAGGCTTGTTTCCCTCAGACTCCATGGCAATTCACTCTCTGGGTCTGTTTCTCAACCAGCATTGCCAAACTCTTCTTGCAAGAATTTGCATTTGCTTGATTTGGGTAGCAACAATTTTTCTGGGAATTTCCCTGAGTTCATTACAACTTTTGGTGGGCTAAAAGAGCTTGACTTAGGGAATAATATGTTTATGGGTGCAATTCCTCAAGGCTTAGCTGGGCTAAGGCTTGAAAAATTGAATCTTTCCCACAATAATTTTAGTGGGGTTTTGCCTTTCTTTGGTGAATCCAAGTTTGGTGTGGATGTTTTTGAAGGGAATAGCCCTGGCTTGTGTGGACCACCTTTGATGAGTTGTACTAAGAACTCTACACTTAGTTCTGGTGCAGTTGCTGGTATTGTTATTAGTTTGATGACAGGAGCTGTGGTTTTGGCTTCTTTGCTGATTGGCTATACGCAAAACAAGAAGAGGAAAGGTAGTGGAGAGAGTGAAGATGAATTGAATGAAGAAGAAGAAGAAGGAGATGAAGAAAATGGTGGTAATGCTGTTGGTGGAGCTGGTGAGGGGAAGCTTATGTTATTCCCTGGAGGTGAGAATTTGACACTAGATGATGTGTTGAATGCTACTGGGCAAGTTATGGAGAAGACATGTTATGGGACAGCTTATAAGGCAAAGCTTGCTGATGGAGGCACCATTGCTTTGAGGTTATTGAGGGAAGGTAGCTGCAAGGATAGGACTTCATGCTTGCCTGTTATAAAGCAATTGGGAAAGATTCGCCATGAGAATTTGATCCCTTTGAGAGCTTTCTATCAGGGGAAGAGAGGGGAGAAGCTCCTTATTTATGACTACCTACCTCTCAGAACCCTTCATGATCTTTTACATGAAACTAAAGCAGGAAAACCAGTGCTGAACTGGGCTAGGAGACACAAGATTGCATTGGGTATAGCAAGAGGGTTAGCTTATCTTCATACAGGATTAGATGTTCCTCTCACTCATGCGAATGTTCGATCCAAGAACGTGCTTGTGGATGATTTCTTTGTTGCCAGGCTCACTGATTTTGGCCTTGACAAGCTGATGATTCCTTCGGTAGCCGATGAAATGGTGGCGCTTGCCAAGACTGATGGCTACAAGGCTCCAGAGCTTCAAAAGATGAAGAAATGTAACTCAAGGACTGATGTTTATGCATTTGGTATATTACTGCTGGAAATCTTGGTTGGTAAGAAACCTGGGAAAAATGGAAGGAGTGGTGAGTTTGTGGATTTGCCTTCAATGGTGAAAGTAGCAGTTTTGGAGGAGACAACAATGGAAGTGTTTGATGTGGAACTCTTGAAAGGGATAAGAAGTCCAATGGAAGATGGGTTGGTGCAAGCACTGAAGCTTGCAATGGGGTGCTGTGCACCAGTGGCATCTGTTAGACCAAGCATGGAAGAAGTTGTGAGGCAATTGGAGGAGAATAGACCCAGGAACAGGTCTGCTTTATACAGCCCTACAGAAACAAGAAGTGGAAGTGTTACCCCATTTTGA 2073 0.4337 MAFLKLFSLYISMSFIFFFIFFFSSCFCKASTSTKSLSSSTSSDVELLLGKIRGSLQGDNENLVLSSWNSSIPLCQWRGLKWVLSNGSPLSCSDLSSPQWTNLSLYKEPSVHLLSLQLPSANLSGSLPRELGEFPMLQSLYLNINSLKGTIPLELGYSSSLSDIDLGDNMLSGTLPPSIWNLCDRLVSLRLHGNSLSGSVSQPALPNSSCKNLHLLDLGSNNFSGNFPEFITTFGGLKELDLGNNMFMGAIPQGLAGLRLEKLNLSHNNFSGVLPFFGESKFGVDVFEGNSPGLCGPPLMSCTKNSTLSSGAVAGIVISLMTGAVVLASLLIGYTQNKKRKGSGESEDELNEEEEEGDEENGGNAVGGAGEGKLMLFPGGENLTLDDVLNATGQVMEKTCYGTAYKAKLADGGTIALRLLREGSCKDRTSCLPVIKQLGKIRHENLIPLRAFYQGKRGEKLLIYDYLPLRTLHDLLHETKAGKPVLNWARRHKIALGIARGLAYLHTGLDVPLTHANVRSKNVLVDDFFVARLTDFGLDKLMIPSVADEMVALAKTDGYKAPELQKMKKCNSRTDVYAFGILLLEILVGKKPGKNGRSGEFVDLPSMVKVAVLEETTMEVFDVELLKGIRSPMEDGLVQALKLAMGCCAPVASVRPSMEEVVRQLEENRPRNRSALYSPTETRSGSVTPF 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1304g00015 690 Gene3D Transferase(Phosphotransferase) domain 1 468 682 - -
Gabi1304g00015 690 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 23 669 IPR046959 -
Gabi1304g00015 690 MobiDBLite consensus disorder prediction 339 365 - -
Gabi1304g00015 690 Gene3D Phosphorylase Kinase; domain 1 379 466 - -
Gabi1304g00015 690 MobiDBLite consensus disorder prediction 666 690 - -
Gabi1304g00015 690 Gene3D Ribonuclease Inhibitor 186 303 IPR032675 -
Gabi1304g00015 690 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 108 200 - -
Gabi1304g00015 690 Gene3D Ribonuclease Inhibitor 47 184 IPR032675 -
Gabi1304g00015 690 MobiDBLite consensus disorder prediction 671 690 - -
Gabi1304g00015 690 SUPERFAMILY L domain-like 80 276 - -
Gabi1304g00015 690 SUPERFAMILY Protein kinase-like (PK-like) 399 666 IPR011009 -
Gabi1304g00015 690 Pfam Leucine rich repeat 212 270 IPR001611 GO:0005515
Gabi1304g00015 690 Pfam Protein tyrosine and serine/threonine kinase 394 665 IPR001245 GO:0004672|GO:0006468
Gabi1304g00015 690 ProSiteProfiles Protein kinase domain profile. 390 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1304g00015 690 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Gabi1304g00015 690 FunFam Leucine-rich repeat receptor-like protein kinase 210 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1304g00015 Gabi-Chr1304 136818 139569 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1304g00015 13 690 Receptor kinase-like Gene Family AT3G24660 73.932 0.0 948
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gabi1304g00015 PK_Tyr_Ser-Thr 1.5e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1304g00015 - - gmx:100814814 1132.86