Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1304g00012 ATGGATGAGTTGTCACCGAACCAGATTGTTGTTGTTCATGGGATTGCTAGTGCTGGCTCAGTGGCTTTAGCCACAGGTTTCACATATCCTCTCGATACCCTCAAAGTCCTCACTCAGGTTGGTTCCAGTGCCGCTAGAGAATTGAATGCTGCCGAGGCTTTGATCAGAGTATTCTCCTTGTCGGGTAATGCAGGTCTGTTCAGTGGTTTTGGCTGGTTGGCATTTGGAAGGATTTTTGGTCTGGGAGCTCGATTTGGGGTTTACGAAATCCTGAAAGCTTATTGCAAAGATGGTCGAGAACTTAATTATATCTCTGGTGCTGAGGCTCTTTTGGCAGGCATGGCAGCTGGTGCCATAGAGACAATTATAAGCTCTCCTTTTGAACTCATCAAGATTCGTATGCAGGTTACCTCAGCTTCGTACGTCCCGAGCTCTAATTTTGCTTTGGAAAAGGGGGCCCGCACACCTTTAGTTGCAAGATTACTTAATGGCTGTTATCCAGACAAGAGGTCATTGAACCAATATGTTGGTCTCATCTCTACCCTCACAACAAAAAATACTAACATGACTGGTGCTTTATTGGAGTATCCATGGGCAATGACAGGATCTGGGAGGCCACCATCAGTTTGCAATGTGAGAAGGCCATCAGACATTATATCTTTGGAAGGATGGAGCACATTATGGAGAGGTCTACGTTCTGGAATTGTTCGAGATTCTGTGTTTGGTGGTGTATTTTTTTCAAGTTGGGAACTTTTGCACCGAGCAATGCTTGGGTGGAAAGCTGTAGGGATGGATCCTATACCCAGCTTAAATGAAGAAATCGGTCCATTGTCTCCCTTGGCTGTTAGTCTTTCTGCTGGATTATCAGCTTCAGTTGCTGCCGCTGCTTCTCATAGTTTTGATACTGCAAGAACTAGATCACAGTGTACTGTGCTGCCAAAGCATCTCTCTATGGAGAGAAGGTTTCTGAAGTGGACACGACCAGGAAACAAGTTTGAAAGAATTACTGGGATCCATCCTGCTGACAGGAATGTCTTGTTCCGTGGTATCGGGTTGCGGATGGCTCGCTCTGGGATTGCATCATTCATGATTGTAGGAAGTTATTTCTTTGTTGTTGATCATCTTGCTTCTAGTTTGACTTAA 1143 0.4497 MDELSPNQIVVVHGIASAGSVALATGFTYPLDTLKVLTQVGSSAARELNAAEALIRVFSLSGNAGLFSGFGWLAFGRIFGLGARFGVYEILKAYCKDGRELNYISGAEALLAGMAAGAIETIISSPFELIKIRMQVTSASYVPSSNFALEKGARTPLVARLLNGCYPDKRSLNQYVGLISTLTTKNTNMTGALLEYPWAMTGSGRPPSVCNVRRPSDIISLEGWSTLWRGLRSGIVRDSVFGGVFFSSWELLHRAMLGWKAVGMDPIPSLNEEIGPLSPLAVSLSAGLSASVAAAASHSFDTARTRSQCTVLPKHLSMERRFLKWTRPGNKFERITGIHPADRNVLFRGIGLRMARSGIASFMIVGSYFFVVDHLASSLT 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1304g00012 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 255 IPR018108 -
Gabi1304g00012 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 8 94 IPR018108 -
Gabi1304g00012 380 SUPERFAMILY Mitochondrial carrier 11 365 IPR023395 -
Gabi1304g00012 380 Gene3D Mitochondrial carrier domain 10 379 IPR023395 -
Gabi1304g00012 380 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 18 370 - -
Gabi1304g00012 380 Pfam Mitochondrial carrier protein 107 142 IPR018108 -
Gabi1304g00012 380 Pfam Mitochondrial carrier protein 11 95 IPR018108 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1304g00012 29 257 Antiporters AT1G79900 23.106 1.62e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1304g00012 - - tpra:123917368 584.334