Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1304g00005 ATGGCCTTCCTTGGAGCTAAAACCAATGGAATTTCACTTAACCAAGTTGAGATCCCTATCCATGCAATTGTTGTTGAGCAAAACCCAAGCCAAGGGGTTGAAGAGAGAAGCAACTTTGACTACTCTCAAAGGGCTCAATGGCTTAGAGCAGCAGTGTTAGGAGCCAATGATGGGTTAGTCTCCGTTGCCTCATTGATGATGGGTGTTGGAGCAGTTAAGGAAGACATCACTGCCATGGTTCTTGCTGGCTTTGCAGGGTTAGTAGCAGGGGCTTGTAGCATGGCAATTGGAGAGTTTGTCTCTGTTTACACTCAGTATGACATAGAGATGGCTCAGATTAAAAGAGATAGGGTAGCAAATATTAATAATAGTAATAATAATGATGATGAAGAAGCTCAAAGAGAGAAGCTTCCAAATCCATTTCAGGCTGCACTAGCATCAGCATTAGCATTTTCAGTGGGTGCTGTGGTGCCACTACTAGCAGCTGTGTTTATAAGGAGTCACAAGATTAGGCTTGGTGTTGTTGCTGCTGCTGTTAGCTTGGCATTGTTGGTATTTGGAGGGGTTGGTGCAGTGCTTGGAAAAACTCCAGTGAGATGGTCTTGTCTCAGAGTGTTAATTGGAGGTTGGATGGCTATGGCCATAACATTTGGCTTGACCAAATTGATTGGCACCACTGGACTTTGA 687 0.4425 MAFLGAKTNGISLNQVEIPIHAIVVEQNPSQGVEERSNFDYSQRAQWLRAAVLGANDGLVSVASLMMGVGAVKEDITAMVLAGFAGLVAGACSMAIGEFVSVYTQYDIEMAQIKRDRVANINNSNNNDDEEAQREKLPNPFQAALASALAFSVGAVVPLLAAVFIRSHKIRLGVVAAAVSLALLVFGGVGAVLGKTPVRWSCLRVLIGGWMAMAITFGLTKLIGTTGL 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1304g00005 228 Pfam VIT family 48 128 IPR008217 GO:0005384|GO:0030026
Gabi1304g00005 228 Pfam VIT family 133 220 IPR008217 GO:0005384|GO:0030026
Gabi1304g00005 228 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 32 223 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1304g00005 Gabi-Chr1304 30086 30772 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1304g00005 34 228 Nodulin-like Gene Family AT3G43660 66.154 4.58e-92 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1304g00005 K22736 - gmx:100802489 304.293