Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1304g00004 ATGGCAAGTTTCCACAAGGTAGAATCGAGCAATATTGACTATTCACAAAGGGCTCAATGGCTTCGTGCTGCTGTATTAGGAGCCAATGATGGGTTGGTTTCTGTTGCTTCATTGATGATGGGTGTTGGAGCTGTCAAAAGAGATGTCAAAGCAATGCTACTTGCTGGTTTTGCAGGATCAGTTGCAGGAACTTGTGGTATGGCAATAGGAGAGTTTGTTTCTGTGTATACTCAGTATGAAGTTGAGGTTGGTCAAATGAAGAGAGATATGAAAATGAGTAGTGAAAAAGGAGAAAAAGACTTGGAGAAAAGGAGAACTTTACCTAATCCATTGCATGCTGCTTTGGCTTCTGCATTCTCTTTTTCTATAGGTGCATTGGTTCCTTTACTTTCAGCTGCATTTGTAACAAATTACAAGATAAGGCTTATTGTGGTTGTGTCAGTGGCTAGCTTGGCTTTGGTGGTGTTTGGAAGTGTGGGAGCTCAGCTAGGAAAGACACCTAAGATAAGATCTTGTGTAAGGTTTCTTCTTGGGGGATGGATGGCTATGGCTATCACTTTTGGGTTAACCAAATTACTTGGCTCTAGCGGTTTGGAATTATGA 603 0.4146 MASFHKVESSNIDYSQRAQWLRAAVLGANDGLVSVASLMMGVGAVKRDVKAMLLAGFAGSVAGTCGMAIGEFVSVYTQYEVEVGQMKRDMKMSSEKGEKDLEKRRTLPNPLHAALASAFSFSIGALVPLLSAAFVTNYKIRLIVVVSVASLALVVFGSVGAQLGKTPKIRSCVRFLLGGWMAMAITFGLTKLLGSSGLEL 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1304g00004 200 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 6 193 IPR008217 GO:0005384|GO:0030026
Gabi1304g00004 200 CDD Nodulin-21 19 168 - -
Gabi1304g00004 200 Pfam VIT family 89 190 IPR008217 GO:0005384|GO:0030026
Gabi1304g00004 200 Pfam VIT family 21 93 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1304g00004 Gabi-Chr1304 21348 26948 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1304g00004 3 198 Nodulin-like Gene Family AT3G43660 62.755 7.58e-85 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1304g00004 K22736 - gmx:100791523 283.878