Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1302g00001 ATGGCTTCCTGCACGTCGCTTTACGAGATTCTCAGAATTCCCGCCGCGGCTTCCAACCAGGAGATCAAGGCGGCGTACCGACGACTGGCCAGGGTCTGCCATCCGGATGCGGCGGCGGTTGGTCGGAAGAACTCGTCGGCAGATGAGTTCATGAAGATCCATGCTGCGTACTCCACCCTATCGGATCCTGAAAAGCGTGCCAGCTATGATAAGAGCTTGTTCCGTCATCAGCAACCGCTGACGACGACGACGGCGTCGAGATTTTCCGGCTACTCTGGTCGGAACTGGGAAACGGACCAGTGCTGGTAG 309 0.5793 MASCTSLYEILRIPAAASNQEIKAAYRRLARVCHPDAAAVGRKNSSADEFMKIHAAYSTLSDPEKRASYDKSLFRHQQPLTTTTASRFSGYSGRNWETDQCW 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1302g00001 102 ProSiteProfiles dnaJ domain profile. 6 73 IPR001623 -
Gabi1302g00001 102 Pfam DnaJ domain 7 70 IPR001623 -
Gabi1302g00001 102 CDD DnaJ 8 62 IPR001623 -
Gabi1302g00001 102 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 3 102 - -
Gabi1302g00001 102 SUPERFAMILY Chaperone J-domain 2 80 IPR036869 -
Gabi1302g00001 102 PRINTS DnaJ domain signature 8 26 IPR001623 -
Gabi1302g00001 102 PRINTS DnaJ domain signature 26 41 IPR001623 -
Gabi1302g00001 102 PRINTS DnaJ domain signature 45 65 IPR001623 -
Gabi1302g00001 102 Gene3D DnaJ domain 4 100 IPR036869 -
Gabi1302g00001 102 ProSitePatterns Nt-dnaJ domain signature. 50 69 IPR018253 -
Gabi1302g00001 102 SMART dnaj_3 5 65 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1302g00001 Gabi-Chr1302 60080 60388 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1302g00001 8 70 C2H2 Transcription Factor Family AT1G74250 43.284 4.52e-09 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1302g00001 - - gmx:100800959 169.474