Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1301g00002 ATGGCTTCCATCCCTAACTTCTATCCAAACTACACATTCACTAGTCATGATATTGCAGGGTTCCCTACCCCAGGGTTTGCTTCATTCAATGGCTATACCTCAGTTATGGACAATAATAACATGTTGGGTACCCAAGATAGCTTCATTCCTGTGCTTGATAATAATGGGGCACTTGATCATGTTGTTTCACTGGATTGTGATACCATTCCTTCTTCTTGGATGCCAACTTTTTCTGAGCAAATAGGGGGCATTTCAGACTTTTCTGTTCCTGCCATTTCTGCAGACTGTAAAATGGACTTATATGGTGGAGGCATTACAGGATTTCAGAATTTCAGCAGCAGATACCAACCACATGTTGGTGAGTTTGTGGAAGAATGTTGTGGGTTTGTTGAGGATATTAAGCCACCTTGTTATCCTAATGCTGCAAGAGAAAACTGGGGAATTCAAGGCAATCAAATGCCAGCAGTTGAAGAGCCCAACATAAAGGTGGGGAGGTACTCAGAAGAAGAAAGGAAAGAAAGAATTCTCCGATATTTGAAGAAAAGAAATCAAAGAAACTTTAACAAAACCATCAAGTATGCATGTCGGAAAACCTTAGCTGATCGGCGGGTCAGAGTTAGAGGAAGGTTTGCAAGAAACAATGAGCTATGTGAGGAAGACATGGCAACAAAAAAGCATGAGAATCATGATCACAAAGAAGACTTTTATGGTGGTGATTCAGTCCAGTTCCAGTTAAAGAACGATGAGGAAGATTGGCTGCAAGAGGCCATGGCAAGTCTGGTTTATTTATCTCATTCTTCACCGGAAGATATGTAA 816 0.4105 MASIPNFYPNYTFTSHDIAGFPTPGFASFNGYTSVMDNNNMLGTQDSFIPVLDNNGALDHVVSLDCDTIPSSWMPTFSEQIGGISDFSVPAISADCKMDLYGGGITGFQNFSSRYQPHVGEFVEECCGFVEDIKPPCYPNAARENWGIQGNQMPAVEEPNIKVGRYSEEERKERILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNELCEEDMATKKHENHDHKEDFYGGDSVQFQLKNDEEDWLQEAMASLVYLSHSSPEDM 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1301g00002 271 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 122 227 IPR045281 GO:0009909
Gabi1301g00002 271 Pfam CCT motif 171 213 IPR010402 GO:0005515
Gabi1301g00002 271 ProSiteProfiles CCT domain profile. 171 213 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1301g00002 Gabi-Chr1301 86461 88361 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1301g00002 167 221 C2C2-CO-like Transcription Factor Family AT5G57660 47.273 2.87e-10 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gabi1301g00002 CCT 8.3e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1301g00002 - - gmx:102660475 425.246