Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi12g00001 ATGGCATTCATCAAATTCATAAAACATCATAGCACCAAGAAATCCCAAAACACTAGACTGCCTCCTGGTCCTACACCTTGGCCCATCGTTGGAAATCTTCCTGAAATGCTTCTAAAAAAGTCAACATTCAGATGGATACAAAAGCTGATGAATGATCTAAACACTGAAATTGCATGCATCCGTCTAGGTAATGTTCATGTCATCCCTGTGACAAGCCCTGAAATTGCACGTGAATTCTTGATCAAACATGATGCTGTTCTTGCTTCAAGACCTTTGAACTGGTCCAGTGAGCATGTCTCAAGTGGATATTTGACCACAGCTCTCGTACCCTTTGGAGAACAATGGAAGAAAATGAAGAAAGTTCTTAGCAATGGTTTGCTTTCACCACTCAGACATCAATGGCTTCATGACAAACGGGTGGAGGAAGCTGATAACCTTGTTCGTTATGTGTACAACCAATGCAAAAATGGTGGACTCGTGAATGTTAAGGTTGCTGCACATCATTATTCTGGGAACGTGATTAGGAGGTTGGTTTTCAACAGAAGGTACTTTGGAAAGGGTAACGAAGATGGAGGACCTGGCTTTGAGGAAGTGGAGCATGTACAAGCACTTTTTACTGTGTTAAGGAACCTCTTTGCTTTTTCTGTTTCTGATTATGTGCCATGTTTGAGAGGACTTGACTTGGATGGTAGTGAGAAAAACATGAAGAGTGCTGTTATGATAGTAAAGAAATATCATGATTCTATCATTGAGGAAAGAATTCAGCAATGGAAGAATGGGGAAAAGAAAGATGAAGAAGACTTGCTTGATGTTCTCATCTCACTGAAAGATGCTGATAACAATGCACTGTTGACAGAGGAGGAAATTAAATCTCAAATTATGGAAATGATGATTGCATCGGTGGATAATCCATCGAATACAATTGAATGGGGACTTGCAGAAATGATAAATCAGCCAGAGTTACTTCGAAAGGCAACTGAAGAATTGGACAATGTGGTTGGAAAGAAAAGGATAGTGCAAGAATCAGATTTTCCCAAGCTAAACTATATAAAGGCTTGTGCAAGAGAAGCTTTTCGCCTTCACCCCATTGTGGATTTTAACATTCCCCATGTCTCAATGGCTGACACAGTTGTTGCTAATTTTTTCATCCCAAAGGGTAGCCATGTGTTGTTAAGGAGACAAGGACTTGGCCAAAACCCAAGAGTTTGGAAAGAACCCTTCAAATTCAAACCAGAACGTCATCTAAAAAGAGATGGGTCTGACTTGGTTTTAACAGAGCCAAGCTTGGAATTGGTAACATTTAGCATTGGAAGGCGTAGCTGTCCAGCGCTCATGCTTGGAACTTCAATGACTATTACGCTATTTGCAAGGTTGCTACATTGCTTCACTTGGAGTGTGCCACCCAATGAGGATAGCATCGACCTCTCTGAATCTGAAGGGGATACCACCAAAGCTAAGCCACTAGTAGCATTTGCAAAGCCAAGGTTGCCAGCGGAAGTTTATGATCACTTATATTAA 1518 0.4097 MAFIKFIKHHSTKKSQNTRLPPGPTPWPIVGNLPEMLLKKSTFRWIQKLMNDLNTEIACIRLGNVHVIPVTSPEIAREFLIKHDAVLASRPLNWSSEHVSSGYLTTALVPFGEQWKKMKKVLSNGLLSPLRHQWLHDKRVEEADNLVRYVYNQCKNGGLVNVKVAAHHYSGNVIRRLVFNRRYFGKGNEDGGPGFEEVEHVQALFTVLRNLFAFSVSDYVPCLRGLDLDGSEKNMKSAVMIVKKYHDSIIEERIQQWKNGEKKDEEDLLDVLISLKDADNNALLTEEEIKSQIMEMMIASVDNPSNTIEWGLAEMINQPELLRKATEELDNVVGKKRIVQESDFPKLNYIKACAREAFRLHPIVDFNIPHVSMADTVVANFFIPKGSHVLLRRQGLGQNPRVWKEPFKFKPERHLKRDGSDLVLTEPSLELVTFSIGRRSCPALMLGTSMTITLFARLLHCFTWSVPPNEDSIDLSESEGDTTKAKPLVAFAKPRLPAEVYDHLY 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi12g00001 505 Gene3D Cytochrome P450 5 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi12g00001 505 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 9 501 - -
Gabi12g00001 505 FunFam Cytochrome P450 9 13 499 - -
Gabi12g00001 505 PRINTS E-class P450 group I signature 75 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi12g00001 505 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi12g00001 505 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi12g00001 505 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi12g00001 505 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi12g00001 505 PRINTS E-class P450 group I signature 169 187 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi12g00001 505 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi12g00001 505 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi12g00001 505 SUPERFAMILY Cytochrome P450 21 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi12g00001 505 Pfam Cytochrome P450 21 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi12g00001 Gabi-Chr12 41792 46035 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi12g00001 15 501 Cytochrome P450 AT5G05260 54.656 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi12g00001 - - gmx:100809902 692.189