Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1299g00001 ATGTGGCTATCCTTCTATATGGATGTTAGTGTCAACCATGACTCTGCCATCCGAAGGTTCTGCCCTGAAAGAATGGAGCATGAGCAAGGAGGAGAGTGGCAAGACCAAGAGGTAGTACTTAATGAGATTGAATTATGTTCTTCTGATGCTACCAGCACTCCTTGTTTGGCTTCTTCAGAAGTTGATGATTTTGTTGATAGCTTCATCAACATGGATCAGTATGAGTATGACAATGTAGATCAAGAGTCCCAAGAGAAGCATCAAAATTTTGATCACTTTGTGGTGAATGATGAAGATGAGGCTGATGCATACTCCGTGGTGAATGACATCTTTGGATATGTTCCAACCACAACCATGGTGGATGTAGAATTGGAGATCTATGAGAATGTCACAATGCCCATCTCGGACGAGGAGGAAGTTGAAATGAGTGGCTCTTATGGTGCTGCTATACCTGAGTTTGTGCCTTGTGTAGAAGAGACTAGCCTTGGTATGGACCAAGGGCTACACTTGGTTCACATGCTGTTGGCATGTGCTGAGTCTGTGGGCTGCAGAGACACCCAACAAACAGAGTTGTTGCTTAGCAGCATTTGGGCTTTGGCAAGTCCTTCTGGAGATTCATTGCAAAGAGTGTCCTACTGTTTTGCCACAGGATTGAAATGTAGGTTGTCACTTCATCCTCATAATGTCATTGCAAATGGTTCGCTCAAAAGTACTCCTACTATGGATGTCCCTTTGATCACTAGGGAGAATAAGTTAGAAGCTTTTCATCTCCTTTACCAAACCACACCTTACATTGCTTTTGGTTTCATGGCTGCAAATGAAGCTATATGCCAAGGGTCACAAGGAAAAGGCTACATACACATAATTGATTTAGGAATGGAGCATACCCTTCAGTGGCCTTCCCTTATTAGGGCCCTTGCGTCAAGGCCTGAGGGGCCTCCAAAACTTAGAATCACAGGATTAATGAACAATGAAGACAACCCTAAACTTCAAACTAGCATGAATTTGCTTGTGGAGGAAGCAAGCTCATTGGGAATACCTCTTGAATTCCACATAATATCAGAGCCTGCAACTCCACCTCTTCTTACTAAGGAGAAGCTAAACTTGAGAGAAGGTGAAGCTTTGTTTGTTAATAGTATCTTGCTGTTGCACAAATATGTCAAAGAAAGTAGAGGCTATCTTAAGGCAATTCTCCAATCAATAAAGAAGCTTGGACCAATTGCAGTTACAGTGATAGAGCAAGACACAAACCATAATGGTCCTTTCTTCCTTGGAAGATTTTTGGAATCACTGCACTATTACTCAGCAATATTTGATTCTCTTGAGGCTAGTATGCCAAGAAATAGCCAACAAAGGATGAAAATAGAGAGATTGCACTTTGCTGAGGAAATTCTTAATATTGTAGCTTACGAGGGTCCAGATAGAATGGAAAGACATGAAAGGGTAGATCAATGGAGAAGACAATTAGCACGAGCAGGATTTCAGGTAATGCCACTGAAATGCACAAGCCAAGCTAGAATGATGCTTTCTGTTTATGACTGTGATGGATATACATTGTCCAATGAGAAGGGTATCCTTCTACTTGGGTGGAAAGGAAGGCCAGTAATGATGGCTTCTGCATGGCAAGTGGCAAGTGTGTAA 1641 0.4211 MWLSFYMDVSVNHDSAIRRFCPERMEHEQGGEWQDQEVVLNEIELCSSDATSTPCLASSEVDDFVDSFINMDQYEYDNVDQESQEKHQNFDHFVVNDEDEADAYSVVNDIFGYVPTTTMVDVELEIYENVTMPISDEEEVEMSGSYGAAIPEFVPCVEETSLGMDQGLHLVHMLLACAESVGCRDTQQTELLLSSIWALASPSGDSLQRVSYCFATGLKCRLSLHPHNVIANGSLKSTPTMDVPLITRENKLEAFHLLYQTTPYIAFGFMAANEAICQGSQGKGYIHIIDLGMEHTLQWPSLIRALASRPEGPPKLRITGLMNNEDNPKLQTSMNLLVEEASSLGIPLEFHIISEPATPPLLTKEKLNLREGEALFVNSILLLHKYVKESRGYLKAILQSIKKLGPIAVTVIEQDTNHNGPFFLGRFLESLHYYSAIFDSLEASMPRNSQQRMKIERLHFAEEILNIVAYEGPDRMERHERVDQWRRQLARAGFQVMPLKCTSQARMMLSVYDCDGYTLSNEKGILLLGWKGRPVMMASAWQVASV 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1299g00001 546 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 125 541 IPR005202 -
Gabi1299g00001 546 ProSiteProfiles GRAS family profile. 161 542 IPR005202 -
Gabi1299g00001 546 Pfam GRAS domain family 170 542 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1299g00001 Gabi-Chr1299 8112 9752 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1299g00001 165 546 GRAS Transcription Factor Family AT1G66350 37.984 2.52e-76 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi1299g00001 GRAS 2.9e-107 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1299g00001 - - gmx:100814931 867.07