Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1296g00001 ATGGATCCGGACGCATTCACCTCCACCCTATTCAAGTGGGACCCACGAACCGTCCTTTCCACTGCGCCGGGAACCCGAACCCCGCTTATGGAGTACACGATGGCTCCGCCGGTGCCCACGGTGGCGCATCCGGTGAGAGCACCGAGTGATCAGCTGCTGGGTGGGCTAGAGGAGCTTTTCCATGCTTACGGCGTCAGATACTACACGGCGGCGAAGGTGGCGGAGCTTGGGTTCACGGTGAGCACACTGGTGGACATGAAGGACGACGAGCTGGACGACATGATGAACAGCCTATCCCAGATTTTTCGTTGGGATCTCCCCGTTGGGGAGCGATACGGCATCAAAGCTGCCGTTAGAGCCGAACGAAGACGCATTGAAGGCCACGACATGAAGCGGCGCAACCTTCTCTCCGCCGACACCACCACCGCCAACACACTTGATGCTCTCTCTCAAGAAGGCTGGATATTAGTGCATGGTAATGGGCCAAATGAGTACCAATCAACCCAAAGTTTGAAAGCAAGATCAACTTTTTGA 534 0.5618 MDPDAFTSTLFKWDPRTVLSTAPGTRTPLMEYTMAPPVPTVAHPVRAPSDQLLGGLEELFHAYGVRYYTAAKVAELGFTVSTLVDMKDDELDDMMNSLSQIFRWDLPVGERYGIKAAVRAERRRIEGHDMKRRNLLSADTTTANTLDALSQEGWILVHGNGPNEYQSTQSLKARSTF 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1296g00001 177 Pfam Floricaula / Leafy protein SAM domain 53 127 IPR035079 -
Gabi1296g00001 177 PANTHER PROTEIN LEAFY 1 153 IPR002910 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1296g00001 Gabi-Chr1296 6019 6706 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1296g00001 1 152 Orphan Transcription Factor Family AT5G61850 55.346 3.70e-37 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Gabi1296g00001 SAM_LFY 3e-42 CL0003
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1296g00001 - - gmx:100799720 221.476