Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1295g00026 ATGAAAGCTCTGTCATGGACACTCATGAACTTGGCTACTCTCTCCACCACACTTTATCTCATTCATGTATTCCCAGAGATCAACCACATACCAAATCCATTGGGAATAGGAATGGTTCCAAGGAATCAAGTGAGTGCTGAGCAAGTGGAGAGTTTTATGGCCCAAGAAAGAGGCAAGAGGAGAGAACTCCTCCACAAGTTCCTCCAATCATGCTCTAATTCCAAGGTTAAGGTAGACACCATCCTGATTGAGAGTGACTTAGTTGCAAAGGCTATCCTCGACCTAATTCCAATTCTTCAGATAAGAAATTTAGTGATCGGAGCCAACAAATTCCATCTAAGAAAATCAAGATCAAGGAAAGGGAATGGCGTAGCCCATCAGATATTGCACAATGCACCACAAAGTTGCAAGGTGAGAATTATATGTGAAGGAAAGGAAGTAAATGAGGAGATGATGTCACCTCCTCCACAGACGCTTACAGCTCGAACCTCTGCTAATGACACTTCCATGACCAGAATTAATGAAGAAGATCAACAACATGATTCGGTTTCATGTATTTGTTTCAAACCAAAGTTTAGATGA 582 0.4158 MKALSWTLMNLATLSTTLYLIHVFPEINHIPNPLGIGMVPRNQVSAEQVESFMAQERGKRRELLHKFLQSCSNSKVKVDTILIESDLVAKAILDLIPILQIRNLVIGANKFHLRKSRSRKGNGVAHQILHNAPQSCKVRIICEGKEVNEEMMSPPPQTLTARTSANDTSMTRINEEDQQHDSVSCICFKPKFR 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1295g00026 193 Gene3D HUPs 1 153 IPR014729 -
Gabi1295g00026 193 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 2 135 - -
Gabi1295g00026 193 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 1 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1295g00026 Gabi-Chr1295 209872 211320 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1295g00026 2 145 Plant U-box Gene Family AT5G57035 28.767 5.11e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1295g00026 - - lja:Lj4g3v0097300.1 293.123