Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1295g00013 ATGGGGTCTGCAAAGCATTCAATTTTCCTCTTATTATCATTCATCCTTTTTTCTCTGTTCCAAGCACCTGTTTTTGCAATTAAAAAGTCTTACATAGTATACTTGGGATCACACGAGCACGGTGCAGAAGTTACAGATTCTGATTTTGAAAGAGTTACTGAATCTCATTATGAATTCCTTCAATCCTATTTGGGAAGTTCTGAGAAATCTAAAGAGGCAATAATATATTCTTACACAAGGCACATTAATGGCTTTGCTGCCATCCTCGAAGAGGAAGAGGCTGCTGATATTGCAAATCATCCAAACGTTGTGTCAGTATTCTTAAACCGAGGAAGAAAATTACACACTACTCATTCGTGGGAATTTATGTCACTGGAACATAATGGTGTAACTCGCTCTGAATCCCTGTTTAGAAAAGCCAGATTCGGTGAAGATGCTATTATTGGCAATCTTGACACTGGTGTATGGCCGGAATCTCCGAGCTTTAGAGATGAGGGGATAGGCCCCATTCCTTCAAGGTGGAAAGGAACATGTCAGAGTGATACCACTGGCTTCCGTTGCAACAGGAAGCTCATAGGAGCGAGGTACTTCAGCAAAGGCTATTCTGCCTATGCGGGGCCAGATGCAATCAATAACAATGTGCTTAACACAGCACGAGATTATGAAGGTCATGGATCTCACACGCTATCAACAATGGGAGGAAACTTTGTTCCTGGGGCAAATGTCTTTGGCTTGGGTAATGGAACTGCCAAAGGTGGTTCTCCTAAATCCCGGGTTGCTACTTACAAGGTTTGCTGGCAACCAATTGATGGCAATGAGTGCTTTGATGCTGATATCATGGCAGCCTTTGATATGGCCATACATGATGGTGTTGATGTTCTTTCCCTCTCTCTTGGAGGGAATGCTGCTGATTATTTTGATGATGGTCTTTCAATTGGTGCATTTCATGCTGTTAAGAAGGGCATCCCTGTAATCTGCTCAGCTGGGAATTCTGGACCAACACCGGGAACTGTTTCAAATATTGCACCTTGGATATTAACAGTTGGTGCAAGCACCTTGGACAGAGAGTTTGATACTAGTGTTGAACTCCAGAATGGAAAGCTCTTTAAGGGAGCAAGCCTTTCTAAAGCTTTGCCGGAAGACAAGTATTATCCACTCATTAGTGCTGCACAGGCAAAAGCGGCTAATGCATCAGTTGGAAACGCTATTCTGTGTAAACAAGGAACAATTGACCCCCAGAAGGTGAAGGGCCAAATATTGGTTTGTCTTAGAGGTGAAACTGCAAGAGTGGAAAAGAGCCTTGTTGCTTTGGAGGCTGGCGCTGCTGGGATGATTCTTTGTAATGATAAGCTTAGTGGTGATGAGCTTATTGCTGATCCTCATCTCCTGCCAGCATCACAAATTAATTATGAAGACGGTCTTGCTCTCTTTGCCTACATCAATTCTACCAAGAATCCGCTAGGATATATTCATCCACCACAAACCAAGTTGCAGATAAAGCCTGCTCCAGTCATGGCAGCTTTCTCCTCTAGAGGGCCCAACACAATCACACCCGAGATCCTCAAGCCTGATGTCACCGCTCCCGGTGTGAATATTATTGCTGCCTACTCAGAAGGGATTAGCCCGACAGAAATGAACTTTGATACACGCAGGGTTCCCTTTATCACCATGTCTGGAACATCCATGTCATGCCCTCACGTGGCTGGAGTTGTTGGCCTTCTCAAGACACTCCACCCTGACTGGAGTCCATCAGCTATTAAATCTGCAATAATTACAACTGCTAGGATAAGGGACAACGATGCTAAGCCAATGCTTGATGGCAATAATGTACTTAAGGCAACACCATTTGCATATGGCTCTGGCCACATCAGACCAAATGGTGCTATGGATCCAGGATTGGTCTATGACCTAACCATCAATGATTACCTAAACTTTCTTTGTATCTCCGGTTATAACCAGACCATGATAAAATTGTTCCCTGGTACTCAATATCGTTGTCCTGATATAGTAAGCATCCTGGATTTCAACTACCCTACAGTAACAATACCTAAACTCTACGGCTCAGTTACTTTGAACCGCAACGTGAAAAATGTTGGTTCACCGGGTACTTATACTGCAAGCCTCCGTGTACCTGCGGGCCTTAACATGTCTGTGGAGCCTAATATCTTGAAATTTGACAAGATTGGTGAAGAGAAGAGCTTTAAGTTGACAGTTGAAGTTACAAGAGGTGGTCTGGCCACAGTATTTGGAGGGTTAACATGGTCAGATGGCAAACATCATGTGAGGAGTACAATTGTAGTTGGCGGCGTCAAAGGTTAG 2319 0.4381 MGSAKHSIFLLLSFILFSLFQAPVFAIKKSYIVYLGSHEHGAEVTDSDFERVTESHYEFLQSYLGSSEKSKEAIIYSYTRHINGFAAILEEEEAADIANHPNVVSVFLNRGRKLHTTHSWEFMSLEHNGVTRSESLFRKARFGEDAIIGNLDTGVWPESPSFRDEGIGPIPSRWKGTCQSDTTGFRCNRKLIGARYFSKGYSAYAGPDAINNNVLNTARDYEGHGSHTLSTMGGNFVPGANVFGLGNGTAKGGSPKSRVATYKVCWQPIDGNECFDADIMAAFDMAIHDGVDVLSLSLGGNAADYFDDGLSIGAFHAVKKGIPVICSAGNSGPTPGTVSNIAPWILTVGASTLDREFDTSVELQNGKLFKGASLSKALPEDKYYPLISAAQAKAANASVGNAILCKQGTIDPQKVKGQILVCLRGETARVEKSLVALEAGAAGMILCNDKLSGDELIADPHLLPASQINYEDGLALFAYINSTKNPLGYIHPPQTKLQIKPAPVMAAFSSRGPNTITPEILKPDVTAPGVNIIAAYSEGISPTEMNFDTRRVPFITMSGTSMSCPHVAGVVGLLKTLHPDWSPSAIKSAIITTARIRDNDAKPMLDGNNVLKATPFAYGSGHIRPNGAMDPGLVYDLTINDYLNFLCISGYNQTMIKLFPGTQYRCPDIVSILDFNYPTVTIPKLYGSVTLNRNVKNVGSPGTYTASLRVPAGLNMSVEPNILKFDKIGEEKSFKLTVEVTRGGLATVFGGLTWSDGKHHVRSTIVVGGVKG 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1295g00013 772 FunFam subtilisin-like protease SBT1.5 354 497 - -
Gabi1295g00013 772 Gene3D - 354 497 - -
Gabi1295g00013 772 SUPERFAMILY Subtilisin-like 114 633 IPR036852 GO:0004252|GO:0006508
Gabi1295g00013 772 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 25 115 IPR037045 -
Gabi1295g00013 772 ProSitePatterns Serine proteases, subtilase family, serine active site. 559 569 IPR023828 -
Gabi1295g00013 772 Pfam Subtilase family 143 603 IPR000209 GO:0006508|GO:0008236
Gabi1295g00013 772 CDD PA_subtilisin_like 360 490 - -
Gabi1295g00013 772 SUPERFAMILY PA domain 399 482 IPR046450 -
Gabi1295g00013 772 Pfam Peptidase inhibitor I9 30 115 IPR010259 -
Gabi1295g00013 772 ProSiteProfiles Serine proteases, subtilase domain profile. 119 629 - -
Gabi1295g00013 772 FunFam Subtilisin-like protease SBT1.5 145 367 - -
Gabi1295g00013 772 Gene3D Peptidase S8/S53 domain 145 642 IPR036852 GO:0004252|GO:0006508
Gabi1295g00013 772 Pfam Fibronectin type-III domain 674 767 IPR041469 -
Gabi1295g00013 772 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 767 IPR045051 -
Gabi1295g00013 772 PRINTS Subtilisin serine protease family (S8) signature 558 574 IPR015500 -
Gabi1295g00013 772 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Gabi1295g00013 772 PRINTS Subtilisin serine protease family (S8) signature 220 233 IPR015500 -
Gabi1295g00013 772 CDD Peptidases_S8_3 113 594 IPR034197 -
Gabi1295g00013 772 FunFam Subtilisin-like protease SBT5.3 20 115 - -
Gabi1295g00013 772 Pfam PA domain 398 476 IPR003137 -
Gabi1295g00013 772 Gene3D - 646 769 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1295g00013 Gabi-Chr1295 85365 90674 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1295g00013 18 767 Subtilisin-like Serine Gene Family AT5G59810 63.660 0.0 987
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1295g00013 - - gmx:100808488 1278.08