Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1295g00002 ATGAAGGATCAGGACGATGTTGATAGTGTGGGAAAAGAGCAGCAGGCTGCGGGAGTGGGAATTCTTCTTCAGATCATGATGTTGGTTTTGTCATTCGTATTGGGTCATCTTCTTCGTCGCAAGAGGATTTACGTCATTCCCGAAGCAAGCGCTTCTCTTCTCATTGGCTTACTCGTTGGTGCACTCGCTAACATTTCCAACACTCAAACTAGTATCAGGGCGTGGTTCAATTTTCACGAGGAGTTTTTCTTCCTCTTCCTCTTACCTCCTATCATATTTCAGTCTGGCTTCAGTCTCTCACCTAAGCCTTTCTTCTCTAATTTTGGAGCAATTGTCACATTTGCTATACTCGGCACCTTTCTAGCTTCCATTGTAACCGGTGTCTTGGTTTATCTTGGTGGATTGATCTACCTCGTCTACAGGCTACCTTTGGTTGAGTGTCTGATGTTTGGTGCTCTTATATCAGCAACTGATCCTGTTACTGTTTTGTCCATATTTCAGGAGCTTGGCACAGATGTCAATCTATATGCCTTGGTTTTTGGAGAATCTGTTTTGAATGATGCAATGGCTATTTCTTTGTACAGGACAATGTCATTGGTTAGAAGTCATCCATCCGGACAAAATTTCTTCATGGTGATTGTTAGATTTTTGGAGACTTTTGTTGGGTCAATGTCTGCTGGTGTTGGAGTTGGATTTATATCTGCTTTACTCTTTAAGTATGCCGGATTGGATATTGACAATCTTCAGAACTTGGAGAGCTGCCTTTTTGTTCTTTTTCCATATTTCTCGTACATGCTTGCCGAAGGTCTTGGCCTGTCTGGTATTGTATCAATATTATTCACGGGAATGGTCATGAAGCATTATACATATTCAAATTTGTCACAAAGTTCTCAAAGATTTGTCTCAGCTTTTTTTGAGTTGATATCATCGCTAGCAGAAACATTTGTATTTATCTACATGGGCTTTGATATTGCTATGGAGCAACATAGCTGGTCACATGTTGGATTTATATTCTTCTCCATTATATTCATTGGAATTGCAAGGGCAGCCAATGTCTTCTCTTGTGCTTATCTGGTCAACTTGGTCAGACCTGCGCATTGTCAGATACCTCCAAAACATCAGAAAGCACTTTGGTATAGTGGACTTCGAGGGGCAATGGCCTTTGCTCTTGCTCTGCAATCGGTTCACGAACTTCCAGAAGGACATGGTCAGACAATCCTCACTGCAACTACAGCAATAGTTGTTTTGACAGTATTGCTGATTGGTGGTTCAACAGGCACCATGCTGGAAGCTTTGGAAGTTGTAGGTGGTGACAGTCATATTAATGATAGCCCTTTGGCTTCTAAATTTGAGGGAAACAATGGTTATATTTCTCCTTCTTCCGATGAAGAATCATCGTCAGGGAGCAAAATCAAGATGAAGCTGAAAGAATTCCAGAAGAGTGCGGCAACTTTTACAGCATTAGATAAAAACTACCTCACCCCATTCTTTACTAGTCAAAATGGCGATGAGGAAGATGAAGTTGAGCCTCTGACTTCTGGAAGGGTGGGATTCCACGGCCATGACCATGACCAATATTCCTTATGA 1587 0.4165 MKDQDDVDSVGKEQQAAGVGILLQIMMLVLSFVLGHLLRRKRIYVIPEASASLLIGLLVGALANISNTQTSIRAWFNFHEEFFFLFLLPPIIFQSGFSLSPKPFFSNFGAIVTFAILGTFLASIVTGVLVYLGGLIYLVYRLPLVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMSLVRSHPSGQNFFMVIVRFLETFVGSMSAGVGVGFISALLFKYAGLDIDNLQNLESCLFVLFPYFSYMLAEGLGLSGIVSILFTGMVMKHYTYSNLSQSSQRFVSAFFELISSLAETFVFIYMGFDIAMEQHSWSHVGFIFFSIIFIGIARAANVFSCAYLVNLVRPAHCQIPPKHQKALWYSGLRGAMAFALALQSVHELPEGHGQTILTATTAIVVLTVLLIGGSTGTMLEALEVVGGDSHINDSPLASKFEGNNGYISPSSDEESSSGSKIKMKLKEFQKSAATFTALDKNYLTPFFTSQNGDEEDEVEPLTSGRVGFHGHDHDQYSL 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1295g00002 528 MobiDBLite consensus disorder prediction 498 528 - -
Gabi1295g00002 528 MobiDBLite consensus disorder prediction 508 528 - -
Gabi1295g00002 528 Pfam Sodium/hydrogen exchanger family 27 430 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Gabi1295g00002 528 PRINTS Na+/H+ exchanger signature 151 161 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Gabi1295g00002 528 PRINTS Na+/H+ exchanger signature 111 119 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Gabi1295g00002 528 PRINTS Na+/H+ exchanger signature 82 93 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Gabi1295g00002 528 PRINTS Na+/H+ exchanger signature 96 110 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Gabi1295g00002 528 PANTHER SODIUM/HYDROGEN EXCHANGER 13 508 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Gabi1295g00002 528 NCBIfam sodium/hydrogen exchanger 3 24 482 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Gabi1295g00002 528 Gene3D - 144 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1295g00002 Gabi-Chr1295 10567 17360 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1295g00002 9 432 Antiporters AT3G05030 34.305 8.82e-56 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1295g00002 K14724 - gmx:100810105 840.491