Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1294g00002 ATGGCAAACTTTTATGAAGAAGCTCCACCTCTTCTTCAAGACCTAAAAGTGACCATCCACAAAACTACAATGGTTTTTCCATCCAAAGAAACTGAGAAGAAGTCATTGTTCTTATCAAACATAGACAAGGTCCTCAATTTCGACGTGGAAACGGTTCACTTCTTTGCAGCAAACAAAGATTTTCCACCCCAAATAGTGACCGAGAAGTTCAAGAACGCCCTAGGAGATGCTCTAGTTGTTTATGACTTCTTAGCTGGAAGATTGAAGCTGAACTCAGAAACAAACAGGTTAGAGATAGATTGCAACGCAGAAGGTGCAGGGTTTGTGGTGGCTTCTAGTGAGTACAAATTGGATCAGATTGGGGACTTGACTTATCCTAATCCAGCTTTTGAACAATTTGTTCATAAGAGTAAGGATTTCCTTAAACCAGGTGATGAGCCGCTCTGTGTTGCTCAGTTGACATCCTTCAAGTGTGGTGGCTTTGCAATTGGGATCACAACCAGTCATACCACCTTTGACGGTCTTAGCTTCAGAACATTCTTGGACAACCTTGCTGCATTGGCTGCTAACAAGCCCTTGGCTGTGATACCCTGCCATGACAGGCATCTTCTAGCCGCACGATCCCCTCCACGTGTCAGCTTCCCCCACCCTGAGTTGATCAAGCTCGGTAACCTACCCACAGGCCTTGACTCCGGGGTCTTTGAGGCCTCATCAGAAGAACTTGACTTCAAGGTTTTTCGGTTAACCTCTGAAAACATCATTAGCCTAAAGGAAAAAGCTAAGGGTAACAACAGTGCCACACGTGTCACTGGTTTCAACGTTATCACCGCTCATTTATGGAGATGCAAGGCTTTATCAGGACCACATGATCCTAATAGATCATCAACTGTACTATATGCTGTGGATATACGTTCAAGGTTGAATCCTCCATTGCCAAAATCATACGCTGGGAATGCTGTGTTGACAGCTTATGCTAATGCAAAGTGTGAGGAACTAGAAAAAGGTTCATTCTCAAGCTTGGTGAAGATAGTGGCAGAGGGTGCAAACAGAATGAGTGATGAGTATGCAAGGTCTGCTATAGACTGGGGAGAGTTATATACTGGTTTTCCAAATGGGGAGGTTTTGGTGTCTTCATGGTGGAGATTAGGGTTTGAAGATGTGGAATTTCCATGGGGAAAACCAAAGTATTGTTGTCCAGTGGTGTATCACAGGAAGGATATTATATTGTTGTTTCCTTCTTTTGGTGGAGATGGTGGTGAAGATGGGGTAAATATTATAGTGGCTCTTCCTCCTAAGGAAATGGAAAAATTCCAGAGTCTCTTTTACAAGTTTTTGATTTGA 1341 0.4325 MANFYEEAPPLLQDLKVTIHKTTMVFPSKETEKKSLFLSNIDKVLNFDVETVHFFAANKDFPPQIVTEKFKNALGDALVVYDFLAGRLKLNSETNRLEIDCNAEGAGFVVASSEYKLDQIGDLTYPNPAFEQFVHKSKDFLKPGDEPLCVAQLTSFKCGGFAIGITTSHTTFDGLSFRTFLDNLAALAANKPLAVIPCHDRHLLAARSPPRVSFPHPELIKLGNLPTGLDSGVFEASSEELDFKVFRLTSENIISLKEKAKGNNSATRVTGFNVITAHLWRCKALSGPHDPNRSSTVLYAVDIRSRLNPPLPKSYAGNAVLTAYANAKCEELEKGSFSSLVKIVAEGANRMSDEYARSAIDWGELYTGFPNGEVLVSSWWRLGFEDVEFPWGKPKYCCPVVYHRKDIILLFPSFGGDGGEDGVNIIVALPPKEMEKFQSLFYKFLI 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1294g00002 446 Gene3D - 13 220 IPR023213 -
Gabi1294g00002 446 Gene3D - 233 444 IPR023213 -
Gabi1294g00002 446 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 23 441 - -
Gabi1294g00002 446 Pfam Transferase family 15 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1294g00002 Gabi-Chr1294 47754 51592 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1294g00002 15 444 Monolignol Biosynthesis Gene Families AT5G48930 31.027 1.02e-59 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1294g00002 K13065 - gmx:100780971 731.865