Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1286g00006 ATGGGTGCGGCGGAGGCGAATATAGCACTTCGAGCTCAGCCTGAAACGACACCGGAGAATGTCGAAGCCTTGCTTGAGGCTGCAAGATATGATGACATGGATGATGTTGTGAGCTTAGCATCCAGTGGTGTTCATCTTGATTCCAAGGATGATCAGGGGAGAACGGCTCTTCATATGGCTGCAGCTAATGGACATGTTGATATTGTGGAGTATTTAATCAGTAGAGGAGTGGATCTTAATTCACAAAATGAGGAAAGGAATACACCTCTTCATTGGGCGTGTCTCAACGGGCATGTTGAGGTTGTGAAGAAACTAATCATTGCTGGAGCTAATGTTAGTGTTTTAAACAGTCACGAGAGGACTCCAATGGATGAAGCTGTGAGTGGGGGTAAGCTAGAAGTGATGGATGCAATTAATGAAGCAGTGGCACTGGTTGAACTTCGTGGAGCTATGGTTTCTGCATAA 465 0.4559 MGAAEANIALRAQPETTPENVEALLEAARYDDMDDVVSLASSGVHLDSKDDQGRTALHMAAANGHVDIVEYLISRGVDLNSQNEERNTPLHWACLNGHVEVVKKLIIAGANVSVLNSHERTPMDEAVSGGKLEVMDAINEAVALVELRGAMVSA 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1286g00006 154 ProSiteProfiles Ankyrin repeat profile. 52 84 IPR002110 GO:0005515
Gabi1286g00006 154 SUPERFAMILY Ankyrin repeat 17 143 IPR036770 -
Gabi1286g00006 154 Gene3D - 89 143 IPR036770 -
Gabi1286g00006 154 ProSiteProfiles Ankyrin repeat region circular profile. 52 84 - -
Gabi1286g00006 154 Pfam Ankyrin repeats (many copies) 72 126 IPR002110 GO:0005515
Gabi1286g00006 154 ProSiteProfiles Ankyrin repeat region circular profile. 85 116 - -
Gabi1286g00006 154 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 17 137 - -
Gabi1286g00006 154 Gene3D - 12 88 IPR036770 -
Gabi1286g00006 154 ProSiteProfiles Ankyrin repeat profile. 85 117 IPR002110 GO:0005515
Gabi1286g00006 154 SMART ANK_2a 52 81 IPR002110 GO:0005515
Gabi1286g00006 154 SMART ANK_2a 118 147 IPR002110 GO:0005515
Gabi1286g00006 154 SMART ANK_2a 85 114 IPR002110 GO:0005515
Gabi1286g00006 154 PRINTS Ankyrin repeat signature 53 68 IPR002110 GO:0005515
Gabi1286g00006 154 PRINTS Ankyrin repeat signature 101 115 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1286g00006 40 152 MAP Kinase Kinase Kinase AT2G31800 31.579 1.38e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1286g00006 - - gmx:100306615 266.544