Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1281g00022 ATGTATTCCAAGTATGATTTTATTAAGGATCTTAATCCTTCTAAGGAGGAGTGGAGGATTAAGGCTAGAGTTGTTAGAACATGGAAGGTTCCTAATTTTCAGCAAAAAATTTTTGACGACAACGTAGAGATGATTCTGTTAGATGAAAAGGGTGGAAGGGTCCATGCTGCTATCAAGGGTTCTTTAAATATCCGTAACAAAATTCACGAAGGAGAATTTTATTTCATAAAAAAATTTGGAGTTGGTTTGAATAGTAGGAGTTTTAGGCCAACTAAGCATGGTTATTGTTTGTCCTTCAACTTGAGGACTGATGTAAAATCCAGTATTGATTCTGCTATTCCCACCAATGGATTAGATTTTGTAGATTTTGACATTATAGAGAAGGAGTCTTCTGATTCCCCTTATTTAGTAGGTTTGTAG 420 0.35 MYSKYDFIKDLNPSKEEWRIKARVVRTWKVPNFQQKIFDDNVEMILLDEKGGRVHAAIKGSLNIRNKIHEGEFYFIKKFGVGLNSRSFRPTKHGYCLSFNLRTDVKSSIDSAIPTNGLDFVDFDIIEKESSDSPYLVGL 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1281g00022 139 SUPERFAMILY Nucleic acid-binding proteins 5 110 IPR012340 -
Gabi1281g00022 139 CDD RPA1_DBD_A_like 19 105 - -
Gabi1281g00022 139 Gene3D - 7 110 IPR012340 -
Gabi1281g00022 139 Pfam Domain of unknown function DUF223 43 133 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1281g00022 Gabi-Chr1281 207957 208463 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1281g00022 11 124 Core DNA Replication Machinery Family AT5G08020 26.016 1.21e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1281g00022 - - tpra:123908197 98.5969