Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1281g00004 ATGTATGGGAGAAAAGCTTGCCAACTTGTGAAAGAATTTGCAAGCGGAGAAAAGGGCCAGCTCTCGCCATTCAATAGTGACTTGTTTGAACAAGTAGTTGCAGAATGCAGTCAACATCATCTTGAGCTTCAGTCCTTGATAAGGAAGATACAGGAAGAAGGTTTGGATGTCCAAACGGCTAGAAATGCAGATCACCATGGAGCCCTCATCCACCATCTTTCTTTAGTCCGAAATAAACGTTGCCTTATGGCCTATGTGTATAATCGAGCAGAAATCATACGCAGCTTGTTATGGAAGGTAGGACATGTGCTTCCTCAAGAAATTGAAGAGAAGCTTAGTCATTCGGAGGAAGAGTATTTCAAGAAGCACTCTGCAGCATTGAAATCTTATATGTCAAAATTGCTAGTTGATCTGACTGTGGATATGGTACCGCCAAAAGATCCTTACATCCAAGTAAGGGTCCTGGATGATATAGGAGAAGGCATTGTGCTTAGTGATGATAAGACTGCCAATTTTTCCCGCCATTCAATGCACTTTCTGAAGCGAACTGATGCGGAGCAATTCATCGCACGGGGCTTAATGGAGGAGCTTATAGGTTGA 600 0.43 MYGRKACQLVKEFASGEKGQLSPFNSDLFEQVVAECSQHHLELQSLIRKIQEEGLDVQTARNADHHGALIHHLSLVRNKRCLMAYVYNRAEIIRSLLWKVGHVLPQEIEEKLSHSEEEYFKKHSAALKSYMSKLLVDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFSRHSMHFLKRTDAEQFIARGLMEELIG 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1281g00004 199 Pfam GINS complex protein 31 116 IPR021151 -
Gabi1281g00004 199 Gene3D - 1 134 - -
Gabi1281g00004 199 PANTHER PARTNER OF SLD5 1 197 IPR005339 GO:0000811|GO:0006260
Gabi1281g00004 199 CDD GINS_B_Psf1 148 197 - -
Gabi1281g00004 199 FunFam DNA replication complex GINS protein PSF1 1 134 - -
Gabi1281g00004 199 CDD GINS_A_psf1 3 134 IPR005339 GO:0000811|GO:0006260
Gabi1281g00004 199 SUPERFAMILY GINS helical bundle-like 1 146 IPR036224 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1281g00004 Gabi-Chr1281 16537 19378 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1281g00004 1 199 Core DNA Replication Machinery Family AT1G80190 71.782 9.43e-108 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1281g00004 K10732 - qsa:O6P43_027860 348.206