Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1278g00029 ATGGCGAGATTGAAGGTGCTATCAGCCCTTGACACGGCGAAGACACAGTACTATCACTTCAAGGCCATAATCATTGCAGGGATGGGGCTATTCACCGATGCATATGATCTCTTCTCAATCACTCTCATCATGAAGATGATAGGAAGGACATACTACAGCGACCGCGACGGCGGCAACCAAAACCAGACCCCACCCGTCGTCGTCTCCGCCTTGGTGGCCGTCGCACTATTAGGAACGGCCATCGGTCAACTGGTCTTCGGTAGGCTCGGCGATCTCAAGGGGCGGCGCCACGTGTACGGATTCGCCTTGTTGTTGATGGTGATGAGCACCTTAGCTTCTGGCTTCTCTATTTGCATTAGAAGAACCTGCGTTCTCCTCTCTCTTGGCTTCTTCAGGTTCTTTCTAGGGTTGGGGATTGGTGGAGACTACCCTCTCTCATCTACCATCATGTCTGAGTTTGCAAACAAAAGGACGCGAGGGTCTTTCATAGCGGCGGTGTTTTCCATGCAAGGATTCGGGATATTGGCCAGCGCCACCGTTACCATGGTGGTGTGCTCCATATTCCACGGCGAAAATGGCATTGACTTTGCATGGAGGTTGATACTGATGATAGGTTCAGTTCCGGCAGGCCTGACGTATTATTGGCGTATGATGATGCCCGAAACTGCCAGGTATACAGCGTTAGTTGAACAAAATGTGTTGCAAGCAGCAAAAGACATGGAGAAAGTTCTTGATGTATCAATAAGCCAGATTGCTGAAGAAAATCCTGAAGAAAATGCGTTTGTATCAAAAACGCATGCGTACTCTCTTTTTTCCAGGGAATTCTTACGTCGACATGGTCGTGATCTTTTTGCTTGTTCCTGTAATTGGTTTCTATTGGATATTGTGTTCTATAGCAACGTTTTATTCCAGAGTCAAATATACGACCGCTTCCTTGGAAGCAACGAAGATAGTACGGTAAAGGGACAGATAAATAGTGCGGATTTGTATCATGAGATTTTCCGTATGGCAAGGATCCAAGCCATTATTGCTGTATGTTCCACCATTCCTGGCTACTTCTTCTCTATGTACTTCATTGACCGTGTAGGAAGAGTCAAAATCCAAATGATGGGCTTTTTCTTCATGGCATTGATTCTTTGGGCCATTGGGATTCCCTATTACTCATATTGGACCACCGATAAACACAAACATAATAAAGGTTTTGTGGTACTCTATAGCCTTGCTTTCTTCTTTGCCAATTTTGGACCCAACACCACCACTTTCATAGTCCCAGCTGAACTATTCCCAGCCAGGTTTAGATCAACATGTCATGGCATTTCTGGGGCTTTTGGCAAGGTTGGTGCAATCATTGGAACCGTTGGATTTCTATGGGCTTCACATAAAGACGAGGAGGACGGATATCCCAAGGCAATTGGAATGCGAACCTCACTTATCATACTTGGAGGTGTGTGCATAGTTGGAATGTTTGTCACCTACTTTTTCACTAGGGAAACCATGGGAATGTCTTTGGAAGATAATGAGGTCGAGCCTGAAGAGGTTAACGGTCTATGA 1551 0.4591 MARLKVLSALDTAKTQYYHFKAIIIAGMGLFTDAYDLFSITLIMKMIGRTYYSDRDGGNQNQTPPVVVSALVAVALLGTAIGQLVFGRLGDLKGRRHVYGFALLLMVMSTLASGFSICIRRTCVLLSLGFFRFFLGLGIGGDYPLSSTIMSEFANKRTRGSFIAAVFSMQGFGILASATVTMVVCSIFHGENGIDFAWRLILMIGSVPAGLTYYWRMMMPETARYTALVEQNVLQAAKDMEKVLDVSISQIAEENPEENAFVSKTHAYSLFSREFLRRHGRDLFACSCNWFLLDIVFYSNVLFQSQIYDRFLGSNEDSTVKGQINSADLYHEIFRMARIQAIIAVCSTIPGYFFSMYFIDRVGRVKIQMMGFFFMALILWAIGIPYYSYWTTDKHKHNKGFVVLYSLAFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAFGKVGAIIGTVGFLWASHKDEEDGYPKAIGMRTSLIILGGVCIVGMFVTYFFTRETMGMSLEDNEVEPEEVNGL 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1278g00029 516 CDD MFS_PhT 23 498 - -
Gabi1278g00029 516 Gene3D MFS general substrate transporter like domains 18 515 IPR036259 -
Gabi1278g00029 516 ProSitePatterns Sugar transport proteins signature 2. 134 159 IPR005829 GO:0016020|GO:0022857|GO:0055085
Gabi1278g00029 516 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 20 503 - -
Gabi1278g00029 516 SUPERFAMILY MFS general substrate transporter 10 507 IPR036259 -
Gabi1278g00029 516 ProSiteProfiles Major facilitator superfamily (MFS) profile. 22 499 IPR020846 GO:0022857
Gabi1278g00029 516 Pfam Sugar (and other) transporter 24 505 IPR005828 GO:0016020|GO:0022857|GO:0055085
Gabi1278g00029 516 FunFam Inorganic phosphate transporter 1-6 18 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1278g00029 Gabi-Chr1278 164718 167446 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1278g00029 1 509 Inorganic Solute Cotransporters AT1G76430 62.075 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1278g00029 K08176 - gmx:100803834 783.867