Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1278g00028 ATGATTTGGTTTCAGAGAATGGCGAGATTGAAGGTGCTATCAGCCCTTGACACGGCGAAGACACAGTACTATCACTTCAAGGCCATAATCATTGCAGGGATGGGGCTATTCACCGATGCATATGATCTCTTCTCAATCACTCTCATCATGAAGATGATAGGAAGGACATACTACAGCGACCGCGACGGCGGCAACCAAAACCAGACCCCACCCGTCGTCGTCTCCGCCTTGGTGGCCGTCGCACTATTAGGAACGGCCATCGGTCAACTGGTCTTCGGTAGGCTCGGCGATCTCAAGGGGCGGCGCCACGTGTACGGATTCGCCTTGTTGTTGATGGTGATGAGCACCTTAGCTTCTGGCTTCTCTATTTGCATTAGAAGAACCTGCGTTCTCCTCTCTCTTGGCTTCTTCAGGTTCTTTCTAGGGTTGGGGATTGGTGGAGACTACCCTCTCTCATCTACCATCATGTCTGAGTTTGCAAACAAAAGGACGCGAGGGTCTTTCATAGCGGCGGTGTTTTCCATGCAAGGATTCGGGATATTGGCCAGCGCCACCGTTACCATGGTGGTGTGCTCCATATTCCACGGCGAAAATGGCATTGACTTTGCATGGAGGTTGATACTGATGATAGGTTCAGTTCCGGCAGGCCTGACGTATTATTGGCGTATGATGATGCCCGAAACTGCCAGGTATACAGCGTTAGTTGAACAAAATGTGTTGCAAGCAGCAAAAGACATGGAGAAAGTTCTTGATGTATCAATAAGCCAGATTGCTGAAGAAAATCCTGAAGAAAATGCGTTTGTATCAAAAACGCATGCGTACTCTCTTTTTTCCAGGGAATTCTTACGTCGACATGGTCGTGATCTTTTTGCTTGTTCCTGTAATTGGTTTCTATTGGATATTGTGTTCTATAGCAACGTTTTATTCCAGAGTCAAATATACGACCGCTTCCTTGGAAGCAACGAAGATAGTACGGTAAAGGGACAGATAAATAGTGCGGATTTGTATCATGAGATTTTCCGTATGGCAAGGATCCAAGCCATTATTGCTGTATGTTCCACCATTCCTGGCTACTTCTTCTCTATGTACTTCATTGACCGTGTAGGAAGAGTCAAAATCCAAATGATGGGCTTTTTCTTCATGGCATTGATTCTTTGGGCCATTGGGATTCCCTATTACTCATATTGGACCACCGATAAACACAAACATAATAAAGGTTTTGTGGTACTCTATAGCCTTGCTTTCTTCTTTGCCAATTTTGGACCCAACACCACCACTTTCATAGTCCCAGCTGAACTATTCCCAGCCAGGTTTAGATCAACATGTCATGGCATTTCTGGGGCTTTTGGCAAGGTTGGTGCAATCATTGGAACCGTTGGATTTCTATGGGCTTCACATAAAGACGAGGAGGACGGATATCCCAAGGCAATTGGAATGCGAACCTCACTTATCATACTTGGAGGTGTGTGCATAGTTGGAATGTTTGTCACCTACTTTTTCACTAGGGAAACCATGGGAATGTCTTTGGAAGATAATGAGGTCGAGCCTGAAGAGGTTAACGGTCTATGA 1569 0.4576 MIWFQRMARLKVLSALDTAKTQYYHFKAIIIAGMGLFTDAYDLFSITLIMKMIGRTYYSDRDGGNQNQTPPVVVSALVAVALLGTAIGQLVFGRLGDLKGRRHVYGFALLLMVMSTLASGFSICIRRTCVLLSLGFFRFFLGLGIGGDYPLSSTIMSEFANKRTRGSFIAAVFSMQGFGILASATVTMVVCSIFHGENGIDFAWRLILMIGSVPAGLTYYWRMMMPETARYTALVEQNVLQAAKDMEKVLDVSISQIAEENPEENAFVSKTHAYSLFSREFLRRHGRDLFACSCNWFLLDIVFYSNVLFQSQIYDRFLGSNEDSTVKGQINSADLYHEIFRMARIQAIIAVCSTIPGYFFSMYFIDRVGRVKIQMMGFFFMALILWAIGIPYYSYWTTDKHKHNKGFVVLYSLAFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAFGKVGAIIGTVGFLWASHKDEEDGYPKAIGMRTSLIILGGVCIVGMFVTYFFTRETMGMSLEDNEVEPEEVNGL 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1278g00028 522 Pfam Sugar (and other) transporter 30 511 IPR005828 GO:0016020|GO:0022857|GO:0055085
Gabi1278g00028 522 ProSiteProfiles Major facilitator superfamily (MFS) profile. 28 505 IPR020846 GO:0022857
Gabi1278g00028 522 SUPERFAMILY MFS general substrate transporter 16 513 IPR036259 -
Gabi1278g00028 522 FunFam Inorganic phosphate transporter 1-6 24 521 - -
Gabi1278g00028 522 ProSitePatterns Sugar transport proteins signature 2. 140 165 IPR005829 GO:0016020|GO:0022857|GO:0055085
Gabi1278g00028 522 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 25 509 - -
Gabi1278g00028 522 CDD MFS_PhT 29 504 - -
Gabi1278g00028 522 Gene3D MFS general substrate transporter like domains 24 521 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1278g00028 Gabi-Chr1278 163320 167446 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1278g00028 7 515 Inorganic Solute Cotransporters AT1G76430 62.075 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1278g00028 K08176 - gmx:100803834 783.867