Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1274g00006 ATGCTTCGGTTTCTTTCAACTGGGTCAAATCTTTTTCAGTCTTTCTCATACTCACCACCAGTTATAAAAACTTTGCGAGTGTTCACTCCTGCCACCTGTTCGACCATTGGCCTAGCCGAAGCCAAGGTTGAAGTCCAAGAACTTGGAAATGAATCGAAGGATGCTAGTGAAGTTTTGAGTAAATGGGGTTGTAATGACGATGATTTGATGAGAATATTTTCACGCTGCCCTTCATTGCGCAATGCTGATGCTACTCAAGTTCAATCTAAGCTCTGCCTGCTGAGTGGATTGGGCATACGGGCATCTGAACTTGTGAAGATTATCATTTGTAGGCCACGATTTTTCAGGTCTCGGTATAACTTAGAGGAGAGGCTTGCTTATCTTATGTCATTGTTTGAGTCAAAGGAGAAGCTTCACAAGGCCATTGTGAGAAACCCTTCACTGCTGGTATGGGACAATCGCTTTGACATTGAAGCTACCCTCGTACTGTATGAAGAGTTAGGTGTTAATAAAAGTGACTTGATTCAAATGCTCCTTTTGCGGCCAATGATTATTACAAGGACTTCATTTGATGATGAGAAGCTGGAATATATAGGAAGGATAGGACTTTCCAAGGATTCAAAGATGTATAAATACGTGGTGACACTAATAGGCATCTCTCGCGTGGAAACAATTCGTGAGAAAATGGCGAATTTGGCAAGATTTGGTTTTTCTGATGATGAGATATTTGGTCTTTTTGGGAGGGCTCCTATTGTTTTGACATTGTCTACTGATAAGGTTCAGAGGAACATGACTTTCATCTTGGGCACAATGAAGCTTGAAGCTAAGATAGTCCTAAAGTACCCGTATCTCTTGTATGCTAATATGGACACTGTTTTGAAGCCACGCGTGCTTGTAGCAATGAAGATACAAGATATGGATTATACGTTTCATATCATAGGACCCACAATAGTTAGGGCACTGAGGATGTCAGAGGAGAGGTTTTTGAATTCGTTTGTCAAATGCCATCACGAGGAAATGGCCAATGAATTAATGGAAATCTATAAAAGGACAAAAGAGGTGAAGAGATTAGCAGAGTCGTCAAAGAAGTGCATTACTAGAGGATTCCCATTCTGA 1116 0.4095 MLRFLSTGSNLFQSFSYSPPVIKTLRVFTPATCSTIGLAEAKVEVQELGNESKDASEVLSKWGCNDDDLMRIFSRCPSLRNADATQVQSKLCLLSGLGIRASELVKIIICRPRFFRSRYNLEERLAYLMSLFESKEKLHKAIVRNPSLLVWDNRFDIEATLVLYEELGVNKSDLIQMLLLRPMIITRTSFDDEKLEYIGRIGLSKDSKMYKYVVTLIGISRVETIREKMANLARFGFSDDEIFGLFGRAPIVLTLSTDKVQRNMTFILGTMKLEAKIVLKYPYLLYANMDTVLKPRVLVAMKIQDMDYTFHIIGPTIVRALRMSEERFLNSFVKCHHEEMANELMEIYKRTKEVKRLAESSKKCITRGFPF 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1274g00006 371 FunFam Mitochondrial transcription termination factor family protein 121 342 - -
Gabi1274g00006 371 Pfam mTERF 58 148 IPR003690 GO:0003690|GO:0006355
Gabi1274g00006 371 Pfam mTERF 120 329 IPR003690 GO:0003690|GO:0006355
Gabi1274g00006 371 SMART mt_12 275 307 IPR003690 GO:0003690|GO:0006355
Gabi1274g00006 371 SMART mt_12 243 274 IPR003690 GO:0003690|GO:0006355
Gabi1274g00006 371 SMART mt_12 207 238 IPR003690 GO:0003690|GO:0006355
Gabi1274g00006 371 SMART mt_12 70 100 IPR003690 GO:0003690|GO:0006355
Gabi1274g00006 371 SMART mt_12 105 134 IPR003690 GO:0003690|GO:0006355
Gabi1274g00006 371 Coils Coil 38 58 - -
Gabi1274g00006 371 Gene3D Transcription termination factor 3, mitochondrial 115 342 IPR038538 -
Gabi1274g00006 371 PANTHER CGI-12 PROTEIN-RELATED 52 338 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gabi1274g00006 mTERF 1.3e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1274g00006 K15031 - gmx:100799629 517.309