Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1260g00022 ATGAATGAGAAGAAGACTCTTCTGTTCTCTTGCATATCAAAAAACAAAAACAAAGAGAAAACAAAGAATATGGGAATGGCAGTAGCAGGAGTTGATTTGCTTAGTGAAAAAGCCTTAGCCATGAGAGAGTCTCTGCAAAAAAGCCAGACAATCACTGACAACGTTGTTTCAATTCTCGGTTCCTTTGACCACCGTCTCTCCGCCCTTGAAACCGCCATGCGTCCTACTCAGATTAGAACGCATTCTATTCGGAAAGCTCATGAGAATATTGATAAGACTTTGAAGTCCGCAGAGGTTATATTGGCTCACTTTGATCAATATTATCAGGCAGAGGCAAAAATAGTTAAAGGGCCACATGAAGATGTGGAGAAATATCTTGAAGCAATTGATCAGCTGAAAAGCAACATTATATTTTTTGGCAGTAAGAAAGGTTTTAAGAGTGGTGATGGTATTGTCAGCCATGCCAATAGTTTGATAACTAAAGCTATTTCTAAGCTAGAAGATGAGTTTAAGCAGCTGTTATCATCTTACAGCAAACCTGTGGAACCTGAGTGCTTGTTTGATTGCCTACCAATCTCAATGCGACCTTCATCAGCATCACCTGGCCATGAAGGTGATCCTAGTGCCAAGAATCATTCTTCTACTGGAACCAATAGCCATTCTGATCCACATAAAAATAATGCTGATGGCGTTATATATACACCTCCTGCTCTTGTACCACCAAGAGTTTTGCCACTGCTCCATGATTTAGCCCAGCAAATGGTTCAAGCTGGTCACCAGCAACAGTTGCTCAAAATTTACAGAGATACTCGTTCTAATGTATTGGAAGAAAGCCTGCAAAAACTTGGAGTTGAGAAACTCAGTAAAGATGATGTTCAAAAGCTACAATGGGAGGTTTTGGAAGCAAAAATTGGAAACTGGATTCATTTCATGCGTATTGCTGTAAAATTGTTGTTTGCTGGAGAGCGGAAAGTTTGTAATCAGATATTTGAAGGATTTGATTCACTTAATGATCAGTGTTTTGCTGAGGTAACTACGAACAGTGTCTTCATGCTACTTAGTTTTGGAGAAGCAATTGCCAAAAGCAAGAGATCACCTGAAAAGTTATTTGTACTTTTGGACATGTACGAAATATTGCAAGAGATCCATTCAGAGATTGAAACAATCTTTAAAGGCAAACCATGCACCGAAATAAGAGAAGCTGCAACGGGTTTGACAAAACGGCTTGCACAAACAGCCCAGGAGACCTTTGGAGATTTTGAAGAAGCAGTTGAGAAAGATGCTACAAAGACTGCAGTAACAGATGGAACTGTCCACCCTTTGACAAGCTATGTGATTAACTATGTGAAGTTTTTGTTTGACTACCGTTCTACCTTGGACAAACTTTTCCAAGAATTTGAAGGTGAAGGTGATTCTTTGCAGCTAGCATCTGTAACAATGCGAATAATGCAAGCTCTTCAAACCAATTTAGACGGGAAAGCAAAGCAGTATAGAGACCCTGCACTGATGCACCTATTTCTCATGAATAATATTCATTATATTGTCAGATCAGTTCGGAGGTCTGAAGCGAAGGATTTGTTGGGGGATGATTGGGTACAACGACATAGGAAGATTGTACAGCAGCATGCAAATCAATACAAAAGAAATGCCTGGGCAAAGATTCTTCAGACCCTCTCTGTTCAGGGCCTCGGCTCATCAGGTGGTGGTGGGGGTGGAACTGCTGGTGGCGATGTTGGAAGTAGTAGCGGTGCTTCCAGAGCAATTGTTAAAGACAGGTTTAAGTCATTCAATACTATGTTTGAGGAACTTCATCAGAAACAATCTCAGTGGACAGTACCTGACACTGAGCTGCGAGAGTCTCTTAGACTTGCAGTTGCTGAAGTCTTGTTGCCTGCCTATAGATCATTTGTGAAACGTTTTGGGCCTCTAGTGGAGAATGGAAAGACTACTCAGAGGTACATCAAATACACTGCAGAAGATCTAGAACGAATCTTGGATGAATTTTTTGAAGGAAAAAACATGAATGAATCGAAGCGGTAA 2040 0.4064 MNEKKTLLFSCISKNKNKEKTKNMGMAVAGVDLLSEKALAMRESLQKSQTITDNVVSILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDKTLKSAEVILAHFDQYYQAEAKIVKGPHEDVEKYLEAIDQLKSNIIFFGSKKGFKSGDGIVSHANSLITKAISKLEDEFKQLLSSYSKPVEPECLFDCLPISMRPSSASPGHEGDPSAKNHSSTGTNSHSDPHKNNADGVIYTPPALVPPRVLPLLHDLAQQMVQAGHQQQLLKIYRDTRSNVLEESLQKLGVEKLSKDDVQKLQWEVLEAKIGNWIHFMRIAVKLLFAGERKVCNQIFEGFDSLNDQCFAEVTTNSVFMLLSFGEAIAKSKRSPEKLFVLLDMYEILQEIHSEIETIFKGKPCTEIREAATGLTKRLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYRSTLDKLFQEFEGEGDSLQLASVTMRIMQALQTNLDGKAKQYRDPALMHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRKIVQQHANQYKRNAWAKILQTLSVQGLGSSGGGGGGTAGGDVGSSSGASRAIVKDRFKSFNTMFEELHQKQSQWTVPDTELRESLRLAVAEVLLPAYRSFVKRFGPLVENGKTTQRYIKYTAEDLERILDEFFEGKNMNESKR 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1260g00022 679 MobiDBLite consensus disorder prediction 197 230 - -
Gabi1260g00022 679 MobiDBLite consensus disorder prediction 207 225 - -
Gabi1260g00022 679 SUPERFAMILY Cullin repeat-like 100 670 IPR016159 -
Gabi1260g00022 679 Gene3D Exocyst complex component Exo70 98 679 - -
Gabi1260g00022 679 Pfam Exo70 exocyst complex subunit 306 667 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gabi1260g00022 679 PANTHER EXOCYST COMPLEX PROTEIN EXO70 81 671 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1260g00022 Gabi-Chr1260 158751 188417 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1260g00022 26 679 EXO70 exocyst subunit family AT5G03540 72.621 0.0 967
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1260g00022 K07195 - gmx:100813987 1068.53