Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi125g00001 ATGGAGGAACATAAATCTGTTATCACTACCTGTGAAGAAGATCAACACATGGTTGCTGCGGCTCAGCACATTTTAAAGGCACTAGCAGCAAGTAAGAACGTTTCTGATGACTTGAGAAAAACTGTCTTGGATCTTGAGATCCAGTTATCTGCAATGTCCATAGTTAATGAAAGAAATGGGAGGGGTATCAAGCAATTAGAGAGGGAGCTTAAAATTGCTGAAGACAAAGTAATGAGTTGGGAGACAAATCATACCATGACATGGGACTCTAGTCCCAGTGAGTTTTCTGAGTATTTAAAAGTTGTTGGTGAAATCCAAACACTGATTCAAAGTTTGCAAAACTTTTCCGTGAATGAAAGTTGGAAGCAGAAGGAACTTCTTCAGCTAGCTACTGGAATTCTGCAGATTGCTATGTCAAGGCTTGAGGAAGAGTTAATTCACATTCTTGTTCAGCATAAACAATACTTTGAGCCAGAATACATGTCTTGCCATTCTAATAGAGAGAATATGGTGTATGATGAATCATTTGGTTCAGTTGAGGATAAACAAATGGATGAGGCATCTCAGAGTAGTGGTGGTAACCAATCTGAGACTAGCACTGTTGATTTGGTGCATCCAGCAATACTTGAAGATCTCAAGAGCATTGCAAATGTCATGTTTTCTTCAAAATACCATCAGGAATTCTATCAGGTCTTCATTACTTCTAGGAGAGATGCCTTGGCTGATTACTTTGTCATTCTTAAAATGGAAAACTTGAGCATTGAGAATGTGCTGAAAATGGAGTGGCATTGCTTGAGCCATGAGATAAAGAAATGGATTCATGCTATCAAGATCATTGTTCATGTTTATCTTGTCAGTGAGAAACGATTATGTAAGCAGATTCTGGGAGACTTTGGACCTGTTTATCAGTTTTGCTTTTCTGAAATATCTCAGAGTTTTGTGTTGCACCTTTTGAATTTTGGTGAGGCCATAGCAATGGGCACATATACACCAGAAAAACTGTTTTGTTTACTTGACATGTATGAGGTTTTGGAGCATCTTGCTGTGGATGTAGATTTTTTGTTCTTTGAAGAAGTTGGTTCCTTTGTTAGGGGAGAGTTTCACAAGCTTCTAAGGAAGTTTGGTGATACTATAAAGTCCACATTTCAGACATTCAGAAATGCTATTGCAACTAATCCATCAAAACCCCGTTTACCTGGAGGGGGTGTTCACCATCTTACCAAGTATGTCATGAATTATATCAAAGCACTTGCTGAATATGGTGACACCCTTAATCTTATTTTTGTAGATCAAAGTTCAATTGATCAAGTACTCAATAATCATGATAACTCAGCTCTCTCATTTTGTCCAATGGCTTGCCACTTTTTGTCAATCACTACCACACTAGAATCCAACTTGAGCAACAAATCCAAATTATACAAAGATGTGGCTTTGCAACATATTTTCATGATGAACAACATTCATTACATGGTGCAAAAGGTTAAGTGCTCTAACCTAAGCCATTTCTTGGGAGATTACTGGCTTCGCCAGCATGTTGGGAAGTTTCAGCATGATGCTAGAAGTTATGAGAGGCTCACTTGGGGTTCAGTCATTTCTATGCTTAAGGAGGGTAGTGGCTCAAATTGTATTTCAGAGAGAACACTAAAGAAAAGGTGCAAAGATTTCAACACTGCCTTTGGTGAAGTATATAGGAAACAAACAGGATGGTTGATACCAGACCCTGAACTTCGTGAAGATCTACAAATTTCAGTTTCTCAGAAGGTAGTTCCTGCTTACCGCACATACACTGGGAGATACTCATCTGACATTGCTGAAAAGTGGATCTGCACTGTAGATGATCTACAAAGTTACATTTTGGACCTTTTTCAAGGTTCACCAAAATCTTTGCACTTTCCTCATCATTAA 1905 0.3848 MEEHKSVITTCEEDQHMVAAAQHILKALAASKNVSDDLRKTVLDLEIQLSAMSIVNERNGRGIKQLERELKIAEDKVMSWETNHTMTWDSSPSEFSEYLKVVGEIQTLIQSLQNFSVNESWKQKELLQLATGILQIAMSRLEEELIHILVQHKQYFEPEYMSCHSNRENMVYDESFGSVEDKQMDEASQSSGGNQSETSTVDLVHPAILEDLKSIANVMFSSKYHQEFYQVFITSRRDALADYFVILKMENLSIENVLKMEWHCLSHEIKKWIHAIKIIVHVYLVSEKRLCKQILGDFGPVYQFCFSEISQSFVLHLLNFGEAIAMGTYTPEKLFCLLDMYEVLEHLAVDVDFLFFEEVGSFVRGEFHKLLRKFGDTIKSTFQTFRNAIATNPSKPRLPGGGVHHLTKYVMNYIKALAEYGDTLNLIFVDQSSIDQVLNNHDNSALSFCPMACHFLSITTTLESNLSNKSKLYKDVALQHIFMMNNIHYMVQKVKCSNLSHFLGDYWLRQHVGKFQHDARSYERLTWGSVISMLKEGSGSNCISERTLKKRCKDFNTAFGEVYRKQTGWLIPDPELREDLQISVSQKVVPAYRTYTGRYSSDIAEKWICTVDDLQSYILDLFQGSPKSLHFPHH 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi125g00001 634 Gene3D Exocyst complex component Exo70 78 630 - -
Gabi125g00001 634 SUPERFAMILY Cullin repeat-like 85 622 IPR016159 -
Gabi125g00001 634 Pfam Exo70 exocyst complex subunit 270 619 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gabi125g00001 634 Coils Coil 56 83 - -
Gabi125g00001 634 PANTHER EXOCYST COMPLEX PROTEIN EXO70 62 624 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi125g00001 Gabi-Chr125 31692 34547 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi125g00001 1 623 EXO70 exocyst subunit family AT5G61010 42.448 1.31e-172 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi125g00001 K07195 - gmx:100791622 959.518