Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1257g00235 TTAAAATATTTCTATCAAACCATACCCGATGCTGTGTCAGCTGTCAACCACAAAGAGTACAGCATGACCTTCATGCCCATCTCACCCCGTTGGAGAGCTTTAAGGAAAATATGCAATGGTCAATTATTCGCCAACAAGACTCTTGATGCCAGCATAGACCTCAGGCGAAAGAAAGTGCAAGAACTCCTCGCTGATATCCATCAAAACAGCCTAAAATGTGAAGCTGTTGAAATTGGAAGCGTGGCTTTCAAGACTGCTATAAACTTGTTATCAAATACTATATTCTCTCTGGATTTGTTTCACTCTACAGGTTCAGCTGGAGAGTTCAAGGAGTTGGTGACAAAAATCATGAAAGAGGTTGGAACGCCAAACTTGGCTGATTATTTTCCTATTCTGAAGATGGTAGACCCACAGGGTGTTAGAAGACGCACTGGTAGTTACGTTATTAAGATTATTGACATCTTTCGGTGCTTGATCAATCAACGATTGAATTTAAGGGAAGGCAAATCCAACACCATGAATTACATGTTAGACACTCTGCTCAACATTTCTCAAGAGAACAGCCACGAAATGGACAATTTACAAATTGAACATTTATTTCTGACTTTGTTTGTTGCTGGAACGGATACAATTACAACTACATTAGAATGGGCAATGGCGGAGGTAATTCGCAACTCAGAGGTTATGTTGAAAGCAAAACAAGAGCTTGAGGAAACCATTGGCATAGGTAACCCGGTGGATGAAACTGACATTGCAAAACTCCCTTACTTAAAAGCAATAATAAAAGAGACTTTTCGATTGCATCCTCCGGTTCCATTTTTAATCCCTCGAAAAGCCAAGACAAATATAGAAATATGTGGCTATACTGTCCCAAAGGATGCACAAGTTCTAGTTAATGTGTGGGCGATTGGCAGAGATTCAAGTGCCTGGGATAATCCAAATCTGTTTTTACCAGAGAGGTTCTTGGGATCAGAAATTGATGTTAAAGGCCATGATTTTGAGCTTGCACCATTTGGTGCTGGGCGACGCATATGTCCTGGCTTGCCACTGGCTATGAGGACATTGCTCTTGATGTTGGGTTCACTTGTCAACTCTTTTAATTGGAAACTTGAAGATCATATGAAATTGGAGGATATAAACATGGATGACAAATTCGGAATTACGATTGAAAAAGCACAGCCCTTGCGAGTTGTTCCGGTCAAAGTAAACAACTGA 1215 0.4049 LKYFYQTIPDAVSAVNHKEYSMTFMPISPRWRALRKICNGQLFANKTLDASIDLRRKKVQELLADIHQNSLKCEAVEIGSVAFKTAINLLSNTIFSLDLFHSTGSAGEFKELVTKIMKEVGTPNLADYFPILKMVDPQGVRRRTGSYVIKIIDIFRCLINQRLNLREGKSNTMNYMLDTLLNISQENSHEMDNLQIEHLFLTLFVAGTDTITTTLEWAMAEVIRNSEVMLKAKQELEETIGIGNPVDETDIAKLPYLKAIIKETFRLHPPVPFLIPRKAKTNIEICGYTVPKDAQVLVNVWAIGRDSSAWDNPNLFLPERFLGSEIDVKGHDFELAPFGAGRRICPGLPLAMRTLLLMLGSLVNSFNWKLEDHMKLEDINMDDKFGITIEKAQPLRVVPVKVNN 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1257g00235 404 SUPERFAMILY Cytochrome P450 18 400 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00235 404 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 338 347 IPR017972 GO:0005506|GO:0016705
Gabi1257g00235 404 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 6 401 - -
Gabi1257g00235 404 CDD CYP76-like 7 399 - -
Gabi1257g00235 404 PRINTS E-class P450 group I signature 335 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00235 404 PRINTS E-class P450 group I signature 345 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00235 404 PRINTS E-class P450 group I signature 195 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00235 404 PRINTS E-class P450 group I signature 215 241 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00235 404 PRINTS E-class P450 group I signature 258 276 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00235 404 PRINTS E-class P450 group I signature 299 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00235 404 FunFam Geraniol 8-hydroxylase 148 398 - -
Gabi1257g00235 404 PRINTS P450 superfamily signature 345 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00235 404 PRINTS P450 superfamily signature 206 223 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00235 404 PRINTS P450 superfamily signature 259 270 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00235 404 PRINTS P450 superfamily signature 336 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00235 404 Pfam Cytochrome P450 15 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00235 404 Gene3D Cytochrome P450 5 402 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1257g00235 Gabi-Chr1257 2120590 2121913 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1257g00235 6 401 Cytochrome P450 AT2G45570 45.906 8.06e-131 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1257g00235 - - gmx:100805772 526.554