Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1257g00234 ATGGATACACTGAGTTGCGTGCTAATCTTGCTACTAACATGCGTTGTTACACAAGCTTTTCTTTCAATTGTTGTAGGAAGAAACAAAGCAAAGTACAAGCTTCCACCAGGACCATTCCCTCTTCCTATAATTGGAAACCTCCTTGCACTTGGCAACAAGCCCCACCAATCCTTGACCAAGCTTGCTAAGATTCATGGCCCCATACTTGCTTTAAAACTAGGCCAAGTAACAACCATAATAGTCTCTTCAGCTGAGTTGGCAAAACAGGTTCTCCAAACCCATGATTCCTCACTTTCAGATAGAACCGTTCCCCAAGCTTTATCAGCTCTCAACCATGACCAGTTTGGCGTGGGCTTCCTCTGTGTTACACCACTCTGGCGTGACATGAGAAGAATATGCAAGAATCAATTATTCTCCAACAAGACTCTCGATGCAAGCCAATACCTCAGGCGCAAAAAAATAGAGGATCTTCTCAGTGATGTGAATCAAAGCTGCATAAGTGGTGAAGCAGTAAATATTGGAGGAGCAGCTTTCAAGACTTCACTTAACTCGTTAACAAATACTATTTTCTCTATAGACTTTATTCAGAATTCAAGTGACACGGGAGAGTACAAGGATATAGTGATGGGAATCTTGAAAGCCGTGGGAACACCAAACATGGCTGATTTTTTCCCATTGTTGAAGACAATTGATCCACAAGGCATCAAAAAGAGCTATGCTTGTTATATTGGTAAGTTGTTCCATGTCTTCGACAACTTAATTCACCAAAGGTTGAAGCTCAGAGAAGGGACAAATTATGTCACCAACAACGACATGCTGGATGCCTTACTCGACATTTCTGAAGATAATAGCAAGGAGATGGACAACGAAAAGATTAAACATCTACTACATGATCTACTTGTTGGGGGAACTGATACAACTGCATATGCACTAGAATGGGCAATGGCTGAGGTGCTTCACAACCCAAATGCTATGTCAAAAGCCAAAAAAGAACTTGAAGAAACTGTTGGAATAGGAAAGCCAATTGAGGAATCAGACATTGTTAGACTCCCTTACCTACAAGCAATTATAAAGGAGACCTTACGCTTGCACCCAATAGCTCCACTTTTGCTTCCTCGAAAAGCCAGGACAGATGTGGAACTCAATGGCTATATCATTCCAAAGGGTGCACAAATACTAGTTAATGAGTGGGCTATTGGCAGGGATCCAGAATCATGGGACAATCCAAACTTGTTTTCTCCTGAGAGGTTTTTGGGGTCAAAAGTTGATATTCAGGGCAAAAATTTTGAGCTCACACCATTTGGCAGTGGACGGAGAATATGTCCTGGTATGCCATTGGCTATCAGGATGTTGCACTTGATGTTGGGTTCATTAATCAATTCTTTTAATTGGAAGCTTGAAAATGGTATGAAATCTGAAGAGATGGACATGGAGGAAGCAATACAAGGACTTGCCATAAGAAAAAGTGAAACCTTGCGAGTTGTTCCAATCAAAATAAGTATTTAA 1506 0.411 MDTLSCVLILLLTCVVTQAFLSIVVGRNKAKYKLPPGPFPLPIIGNLLALGNKPHQSLTKLAKIHGPILALKLGQVTTIIVSSAELAKQVLQTHDSSLSDRTVPQALSALNHDQFGVGFLCVTPLWRDMRRICKNQLFSNKTLDASQYLRRKKIEDLLSDVNQSCISGEAVNIGGAAFKTSLNSLTNTIFSIDFIQNSSDTGEYKDIVMGILKAVGTPNMADFFPLLKTIDPQGIKKSYACYIGKLFHVFDNLIHQRLKLREGTNYVTNNDMLDALLDISEDNSKEMDNEKIKHLLHDLLVGGTDTTAYALEWAMAEVLHNPNAMSKAKKELEETVGIGKPIEESDIVRLPYLQAIIKETLRLHPIAPLLLPRKARTDVELNGYIIPKGAQILVNEWAIGRDPESWDNPNLFSPERFLGSKVDIQGKNFELTPFGSGRRICPGMPLAIRMLHLMLGSLINSFNWKLENGMKSEEMDMEEAIQGLAIRKSETLRVVPIKISI 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1257g00234 501 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00234 501 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00234 501 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00234 501 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00234 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Gabi1257g00234 501 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00234 501 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00234 501 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00234 501 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00234 501 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00234 501 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00234 501 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00234 501 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00234 501 SUPERFAMILY Cytochrome P450 35 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00234 501 CDD CYP76-like 62 496 - -
Gabi1257g00234 501 Gene3D Cytochrome P450 25 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00234 501 Pfam Cytochrome P450 35 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00234 501 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 8 498 - -
Gabi1257g00234 501 FunFam Cytochrome P450 76C4 26 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1257g00234 Gabi-Chr1257 2089983 2092112 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1257g00234 1 498 Cytochrome P450 AT2G45550 43.590 4.10e-161 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1257g00234 - - gmx:100798291 605.52