Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1257g00222 ATGGGGGATGGAGGAGATGCAGTTGGGATGAGAGGTCTCAATGAAGAAGAAGATGATGATGTTGGAAAGAATGAAGAAGAAAACAAGTGGCCACCGTGGCTGAAGCCACTTCTCCAAACAAGCTTCTTTGTTCAATGCAAAGTTCACGCTGATTCCCACAAAAGTGAATGCAATATGTATTGCTTGGACTGTATGAATGGAGCCCTTTGCTCTGCCTGTTTGGCTTCTCACAGAGAACACAGAGCTATTCAGATAAGGAGGTCATCATACCACGATGTGATAAGGGTGTCTGAGATACAGAAATTTCTGGACATAACAGGGGTCCAGACATACATTATCAACAGTGCCAAGATTGTGTTCTTGAATGAAAGGCCTCAACCTAGGCCTGGCAAAGGAGTCACCAATACCTGCCAGGTCTGTGAGCGCAGTCTTCTTGATTCCTTCAACTTCTGCTCTCTTGGTTGTAAGGTAGTTGGAACCTCCAAGAAGTTCCGGAAGAAAAAAATGTTAGCTGAGAAAGATGGGTCTGATGGTGAAGAATCAGTGAATGGCATTAGCAAAAGAAGTGCCAGGAACAAAATCCAGAGCTTTACTCCATCAACACCACCACCAACAGTGGTTAATTACAGGACTGCTAAGAGGAGGAAGGGAGTCCCACATAGAGCTCCAATGGGAGGAGGTCTTATTATAGAATACTAA 699 0.4449 MGDGGDAVGMRGLNEEEDDDVGKNEEENKWPPWLKPLLQTSFFVQCKVHADSHKSECNMYCLDCMNGALCSACLASHREHRAIQIRRSSYHDVIRVSEIQKFLDITGVQTYIINSAKIVFLNERPQPRPGKGVTNTCQVCERSLLDSFNFCSLGCKVVGTSKKFRKKKMLAEKDGSDGEESVNGISKRSARNKIQSFTPSTPPPTVVNYRTAKRRKGVPHRAPMGGGLIIEY 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1257g00222 232 CDD Bbox2 46 85 - -
Gabi1257g00222 232 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 25 224 - -
Gabi1257g00222 232 MobiDBLite consensus disorder prediction 10 27 - -
Gabi1257g00222 232 Pfam PLATZ transcription factor 86 157 IPR006734 -
Gabi1257g00222 232 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1257g00222 Gabi-Chr1257 1965659 1968227 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Gabi1257g00222 PLATZ 2.4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1257g00222 - - gmx:100796834 439.884