Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1257g00215 ATGATGGATGGATTGGAGAGGCCACATGCGCAAATGAATGCCAATAACATGGAGATGTCAGCATTAGCCCAGAAGCATAAGCAGGAGCAGCAGCAACCCTTTAATACACTTTCCCATTGGAAGCATTACCTGCTGCAAAATTTAAAGATGAACAGGTTTGCCTATCTGGGACGAAAATTACATCATCTTTTTCGTTATTCATGTTGTAAGGCAGCTTCACTCATCCGATTCCATCAGACCCTGATTGTGCATCTGTATTGGTTCACAGTCTCCCATGTACACCCATATTTTATTCACCTTGGTTATTTCATAATCTTATCCTTGTTAGGATATCTGGCTTTGAAGTTCTCGAAGCCAAGAACTTTCCCTGTTTGGTCTAATGACTTTAACTTGTTCTTCACCTCAGTCTCAGCTTCCACAGTTTCTGGTCTTTCAGTGATGGAAATGGAGGTTCTTTCCAACAACCAACTTATCATTGTTACCATTCTCATGTTACTAGGTGGGGAGATTTTCACTTCCCTGCTTGGACTTGTCTTTTCTTGGTTTAACTTCCCCAATCATCAAAGTAACAAAAACAGTGGAAATAACCCAAATTCTAGGGAGGATCAAATTGAGCTGGGTGTATTATCTATCTCTGATTCTGAGCCACAGAACAAAAACGACCAAGTTACTACTTCTCAAAATGGTAATGTGGACAATCTGAATCTGAAACACAGTTCCATTAAGCATCTGGGATATGTTGTTGTGGGTTATCTAATAATAGTTCATTCTGTTGGTTGTATTATGGTGTCCTTGTACTTAAGCATTGTTCCCAGTGCAAAAGGAATGCTCAGAAACAAGGGCCTGAAGTTACAGACATTTGCAGTTTTTACCATAGTTTCTAGTTTTGCCAATTGTGGGCTTGTCCCCACGAATGAGAACATGATAGTTTTAAAGAAGAATTCAGGTCTCCTTCTGCTTCTCATTCCATATATGCTTCTGGGAAACACGTTGTACCCTCCATGCCTGAGGCTAGTAATCTGGGCATTGGGAAAAAGTAGCAACAGAGAGGAATTCTTTTACATTTTGAAAAACCAAAGACAGATGGGTTATTATCATATGCTTTCTCGTTTCCATTGCTATCAGCTGGTTATTACTGTTTTTGTGTTGTTTGCCGCACAGTTCATACTGTTCTGCTCTCTGGAGTTGAACTCGGAAAACTTGGAGGGTCTAAATCTCTATCAGAAATTGGTTGCACTCATGTTTCAAACTGTGAATTCAAGACATGCAGGTGAATCTGTACTCAACCTTTCTACCGTCTCTTCTGCCATTTTGGTGCTCGTGGTTGTCATGATGTATATGCCACCATACACAAGGTTTTTGCCGATAAGGGACGAAGAAGACAATAATAAAAAAGACAAGAAGAGGAGCAATAGAACAAAGAGTATAATGGAGAATCTTCTGTTATCACAAATATCTTATTTGGCGATTTTCGTAATTCTAATATGCATCACCGAGAGAGACAAGTTCAGACGAGATCCCCTCAACTTTAATCTCTTGAGCACTACAATAGAAGTCGTTGGTGCATATGGGAACGTGGGGTTTTCAACGGGATATAGCTGTGAGAGGCAACTAGAACCTGATGGTCACTGCAAAAAGGGTTGGACAGGTTTGGCAGGACATTGCAGCATCAAAGGGAAACTGATACTCACTCTCGTCATGTATTTTGGCAAGCTTAAAAAGTTCAGCAGGAATGGTGGCAAAGCATGGGCCCTATCTTAA 1761 0.4055 MMDGLERPHAQMNANNMEMSALAQKHKQEQQQPFNTLSHWKHYLLQNLKMNRFAYLGRKLHHLFRYSCCKAASLIRFHQTLIVHLYWFTVSHVHPYFIHLGYFIILSLLGYLALKFSKPRTFPVWSNDFNLFFTSVSASTVSGLSVMEMEVLSNNQLIIVTILMLLGGEIFTSLLGLVFSWFNFPNHQSNKNSGNNPNSREDQIELGVLSISDSEPQNKNDQVTTSQNGNVDNLNLKHSSIKHLGYVVVGYLIIVHSVGCIMVSLYLSIVPSAKGMLRNKGLKLQTFAVFTIVSSFANCGLVPTNENMIVLKKNSGLLLLLIPYMLLGNTLYPPCLRLVIWALGKSSNREEFFYILKNQRQMGYYHMLSRFHCYQLVITVFVLFAAQFILFCSLELNSENLEGLNLYQKLVALMFQTVNSRHAGESVLNLSTVSSAILVLVVVMMYMPPYTRFLPIRDEEDNNKKDKKRSNRTKSIMENLLLSQISYLAIFVILICITERDKFRRDPLNFNLLSTTIEVVGAYGNVGFSTGYSCERQLEPDGHCKKGWTGLAGHCSIKGKLILTLVMYFGKLKKFSRNGGKAWALS 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1257g00215 586 Pfam Cation transport protein 237 538 IPR003445 GO:0006812|GO:0008324|GO:0055085
Gabi1257g00215 586 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 70 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1257g00215 Gabi-Chr1257 1917675 1926101 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1257g00215 115 585 Inorganic Solute Cotransporters AT4G10310 46.555 8.68e-142 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1257g00215 K24976 - gmx:100800875 532.332