Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1257g00196 ATGTTCTCTTCCACTTACAGCTCCAACCCTTCACCATCATCATCTTGTTACCCTCCTCTTCCTTTTGTTATTGATCCTGACAATGCTTTTGCAAGTAACACCCTCCTTTATGACCCATTTACTGTTCCTTACATGGCCAGTAGTACTCAAGCTCCAATCCCTGATACTGTAACCAATTTGACAGTTGAAGACTGTGATGCTATGCTCCTAAAAGATGCCAATCGCAAATATGGTGCCTCTTATGGTAGTACTAGTATTTCTAGTTTTCTCACAAAGAAACCAGCCAAGAAAGATAGGCACAGCAAGATTTACACATCTCAGGGTTTGAGGGATCGCAGGGTGAGATTGTCCAGCGAAATTGCACGCAAGTTCTTTGATCTTCAGGACATGTTAGAGTATGACAAACCAAGCGATACTCTTGAGTGGCTCTTCACAAAGTCTGAGAATGCAGTTAAAGAACTAGCTCGTAGTAAGCATAGCTGCAATAATGGGGTGCATGCTAATTGCTTCTGCTTCTCTTCTGAACTACAAGGGGTTGGTTCAAATGACAAAATATTGAAGGGTGCTGGTGCTGGTGCTGGTGCTGCAAAAGAGAAGAAGTTGAAATGGGTGGATAAGGAAGATGTTTGTGTTCAGGAAAAAAAGGAGCCTAGGGGAAAGGCAAGAACGAGAGCAAGAGAAAGGACTAGTTCAAAGATGTGTAATAATGGGAAGGTGCAAGAAATGGAGGAGAGTTTACCTGAAAATGCAAATCCTCAAATCCTGCAGCAATTGATGTCACCTTTTCAGCCTCAGGGTTCTGCAATATGGCCTTATAAGCTGGTTCATCCTCATCCTCACCCTCACCTACTGTGTTATGAAGCACCCGGAGATTCTGTTGTAATAAAACGGAATTTGAAGCCATCTTTGCTGTCTTCATCTCATCCCCAAAACCTTGTGATCCCTAAGGAACCATGTTTCAACAATAATGATTATAATTTAATGCCCAGATCGCCTTCAATTTGGGATGCTACTGGGGCCAATAATGACTGCTCCAACTTCAGCGCGGACTATATAGCATGA 1062 0.4275 MFSSTYSSNPSPSSSCYPPLPFVIDPDNAFASNTLLYDPFTVPYMASSTQAPIPDTVTNLTVEDCDAMLLKDANRKYGASYGSTSISSFLTKKPAKKDRHSKIYTSQGLRDRRVRLSSEIARKFFDLQDMLEYDKPSDTLEWLFTKSENAVKELARSKHSCNNGVHANCFCFSSELQGVGSNDKILKGAGAGAGAAKEKKLKWVDKEDVCVQEKKEPRGKARTRARERTSSKMCNNGKVQEMEESLPENANPQILQQLMSPFQPQGSAIWPYKLVHPHPHPHLLCYEAPGDSVVIKRNLKPSLLSSSHPQNLVIPKEPCFNNNDYNLMPRSPSIWDATGANNDCSNFSADYIA 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1257g00196 353 Pfam TCP family transcription factor 95 235 IPR017887 -
Gabi1257g00196 353 ProSiteProfiles R domain profile. 215 232 IPR017888 -
Gabi1257g00196 353 ProSiteProfiles TCP domain profile. 96 154 IPR017887 -
Gabi1257g00196 353 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 92 275 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1257g00196 Gabi-Chr1257 1831673 1832734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1257g00196 92 263 TCP Transcription Factor Family AT1G67260 35.567 2.58e-25 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gabi1257g00196 TCP 4.2e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1257g00196 - - aprc:113871835 320.857