Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi1257g00185 | ATGGACACACCAGAGAGGAACCAGATCAACCCTCCCGTCTCTCAATTCGAGGATTCACCTGTGTTCAACTATATCAATAATTTATCTCCTATAAAGCCCGTTAAGTCTGTTCACATTACTCAGACTTTCAATTCACTTAGCTATTCATCCCCACCATCTGTTTTCACATCACCCCATGTTAGCTGTCTCAAGGAATCTAGATTCCAACGGAGACATAACCCATTGGGTACATCAAAGCCTAAGGTTTCATCTGAAGATGTAAATAAAGTTTACTCGAGTGATCAGGCTCTTGCAGATTCTACTCATGCACATCATTACTCAAGTGAATTACAGGAAAATACTGATCAAGGGATTTCCGTTGGAGATACTTCCATTGAGCTATCTAGTGAACACACAAAATTCTCAGTTGAGCTACCCCAAGCCTTAAAATATAATTGTGGTAACCCTGGCTATGATCCTCCACTTTGTGCTGATGAGGTTAACTCTCTTTTGGAATTGCCTGCTGAGGCAGCATCAGATGTTGCCCATGTTCAGGAAGGCTGTAAAACAGATTCAGTTGAGGATGGGGTACATGTTCGGGGAATATGTCAGGCTGAGCCAAAGAGTGAAGGCCCTGACTGTGATTGGGATAGTTTAATTCCCGATGCCACTGATCTTTTAATTTTTAATTCCCCAAATGAAGCAGAAGCTTTGAAGGGCCTACTGCAGAAACCGCGCAGCGATTTTATGTTTCTGCTACCACAATCCACCATCAATAATGGTCAGAAAATGCAAGTTGTTGATGCAGTTGCTTCTGGTTCTGAACATGAAATTGAAGATCATTGTTCTGAGCAAATAGCAGCCACAGATGCAGACCATACACAGGAAAATCTTGCCAATATTGCTCTGATGACGAGCAATCCTAATGAGAAAACAGATGATGAGCTTGTTTCTGTCATGCGTGGTGGTGGTGGTGGTGGTGGTACACTGAGACGCTGTTTAGACTTTGAGATGGCCCGTGTGCGAACGAAGAATACAGATGAGAATTCGAACACTGGTTCTAATGCATCGCAGTCTGATGAGAGGAATGCTACTAATGAAAAGCATCTGCTTCCTACAAAACGCAATGGGAATTCACAAAGGTGCATTTTGCCTGGAATTGGTTTACACTTGAACGCACTTGCAAACTTAAAAGATTACAAAGGCATGAATAATGAAAAATTGTCTTCTGGAAGACAACTCAGTCTACCCAGCTCCACTTCTTCCTTGCATCTCTCTATAAGCCAAGAACATCAGCATCTATCTTTGGTATCTGTATCATCTGAAAGAGACTTGGTTCCATCAGACAATGGGGTTCAGCCTGCTGAAGATTGTTCCCAGGGATCAGCTTACATGGCTGGTGAAGATTTCAATCAGAACAGCCCCAAAAAGAAAAGGCGTAAATCAGAAACTGGGGGCTGCAAACATTGTAATTGCAAGAAATCAAAATGTTTGAAGCTTTATTGTGAGTGCTTTGCTGCTGGTGTCTACTGCATAGAACCTTGCAATTGTCAGGATTGCTTCAACAAACCCATTAATGAAGATACTGTTGTTCAAACTCGCAAGCAGATTGAATCTCGTAACCCAATTGCATTTACTCCTAAAGTCATTGAAACCGAGGATGAACCAAATAAAACTCCAGCTTCAGCACGACACAAAAGAGGATGCAACTGCAAGAAATCAAGCTGCCTAAAGAAATATTGTGAATGTTATCAGGGGGGTGTTGGTTGCTCCATTAGCTGTAGATGTGAAGGGTGCAAGAATGCATATGGTAGAAAGGATGGTTCTGCTCCTATAGGAATAGAAGCTGAGCCAGAAGAAACAGAAGCATGTGACAAGGCTGTGGTGGAAAAAGCTTTACAGAAAACTGAAATTCAGAATATTGAACATCACCCACATTCTGTTCTTGAGGCAACACCGTTACGGATTTCCAGGCCCTTGCTTCTTTTGCCCTCTTCATCAAAAGGAAAGCCACCAAGATCTTTTGTTACAACCATCTCTGGTTCTTCTGGATTGTTTACCAATCAAAAGCATGGGAAATCCAATTCTGTTTGGTCTCCATCTAAGCATTTTCAAACTGTTCCAGATGATGAAATGCCAGATATTCTCCGAGGTGATAGCTCTCCTATCACTTGCATCAAAACTTCTTCTCCAAATGGCAAGAGAATCTCCTCTCCTAACTGTGACTTGGGATCATCTCCTAGTCGTAGAGGTGGCAGGAAGTTGATATTACAATCCATTCCTTCCTTTCCTTCTCTCACCCCTCATCATTAA | 2292 | 0.421 | MDTPERNQINPPVSQFEDSPVFNYINNLSPIKPVKSVHITQTFNSLSYSSPPSVFTSPHVSCLKESRFQRRHNPLGTSKPKVSSEDVNKVYSSDQALADSTHAHHYSSELQENTDQGISVGDTSIELSSEHTKFSVELPQALKYNCGNPGYDPPLCADEVNSLLELPAEAASDVAHVQEGCKTDSVEDGVHVRGICQAEPKSEGPDCDWDSLIPDATDLLIFNSPNEAEALKGLLQKPRSDFMFLLPQSTINNGQKMQVVDAVASGSEHEIEDHCSEQIAATDADHTQENLANIALMTSNPNEKTDDELVSVMRGGGGGGGTLRRCLDFEMARVRTKNTDENSNTGSNASQSDERNATNEKHLLPTKRNGNSQRCILPGIGLHLNALANLKDYKGMNNEKLSSGRQLSLPSSTSSLHLSISQEHQHLSLVSVSSERDLVPSDNGVQPAEDCSQGSAYMAGEDFNQNSPKKKRRKSETGGCKHCNCKKSKCLKLYCECFAAGVYCIEPCNCQDCFNKPINEDTVVQTRKQIESRNPIAFTPKVIETEDEPNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNAYGRKDGSAPIGIEAEPEETEACDKAVVEKALQKTEIQNIEHHPHSVLEATPLRISRPLLLLPSSSKGKPPRSFVTTISGSSGLFTNQKHGKSNSVWSPSKHFQTVPDDEMPDILRGDSSPITCIKTSSPNGKRISSPNCDLGSSPSRRGGRKLILQSIPSFPSLTPHH | 763 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi1257g00185 | 763 | MobiDBLite | consensus disorder prediction | 334 | 372 | - | - | |
Gabi1257g00185 | 763 | SMART | CXC_2 | 478 | 519 | IPR033467 | - | |
Gabi1257g00185 | 763 | SMART | CXC_2 | 557 | 598 | IPR033467 | - | |
Gabi1257g00185 | 763 | MobiDBLite | consensus disorder prediction | 67 | 86 | - | - | |
Gabi1257g00185 | 763 | MobiDBLite | consensus disorder prediction | 459 | 478 | - | - | |
Gabi1257g00185 | 763 | PANTHER | PROTEIN TESMIN/TSO1-LIKE CXC 2 | 1 | 762 | IPR044522 | GO:0003700 | |
Gabi1257g00185 | 763 | ProSiteProfiles | CRC domain profile. | 479 | 597 | IPR005172 | - | |
Gabi1257g00185 | 763 | MobiDBLite | consensus disorder prediction | 679 | 696 | - | - | |
Gabi1257g00185 | 763 | Pfam | Tesmin/TSO1-like CXC domain, cysteine-rich domain | 560 | 595 | IPR005172 | - | |
Gabi1257g00185 | 763 | Pfam | Tesmin/TSO1-like CXC domain, cysteine-rich domain | 481 | 516 | IPR005172 | - | |
Gabi1257g00185 | 763 | MobiDBLite | consensus disorder prediction | 679 | 745 | - | - | |
Gabi1257g00185 | 763 | MobiDBLite | consensus disorder prediction | 715 | 738 | - | - | |
Gabi1257g00185 | 763 | MobiDBLite | consensus disorder prediction | 338 | 354 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi1257g00185 | Gabi-Chr1257 | 1724832 | 1730234 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi1257g00185 | 16 | 763 | CPP Transcription Factor Family | AT4G14770 | 41.935 | 3.11e-143 | 434 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | CPP | Gabi1257g00185 | TCR | 3e-11 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi1257g00185 | - | - | gmx:100804447 | 1149.81 |