Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1257g00169 ATGGATTTTGTAAGTTGTGCACTGCTCATTCTGTTGACGTGCGCCACCATTCATGTTCTTTGTTCATTCCTTGTAAGAAGCAGAAAACCAAACTACAAGCTTCCACCAGGACCTTCCCCTCTTCCCATTGTAGGAAACCTACTTGAACTGGGTCACAAGCCTCACGAGTCGTTGGCCAAGCTTGCTAAGATTCACGGCCCTGTAATGAGCTTAAAGCTAGGCCAAATAACCACTGTAGTTGTCTCTTCAGCTGAGATGGCCAAAGAGGTGCTCCTAACCCATGATCACTCCTTGTCAAATAGGACCATCCCTCAGTCAGTCTCAGTTCTAAACCACGAGAACTATAGCTTGGCCTTCATTCCCGTTTCCCCACTTTGGCGAGACCTGAGGAAAATATGCAATGGTCAGTTATTTTCACACAAAACTCTTGATGCCAGCCAAGATGTTAGACGTAAGAAAGTGCAACAGCTCCTCACTGAAATCCACCAAAGCAGCCAAATTGGTGAAGCAGTGGACATTGGAACAGCAGTTTTCAAGACCACCATCAATTTACTATCAAACACCATTTTCTCTGTGGATTTGGTTCACTCTGCTGGTACAGCAGGTGAGTTCAAGGACTTAGTGACGAATATCACAAAACTGGTTGGAACACCAAACTTGGCGGATTATTTTCCTGTTCTGAAGATGTTTGATCCACAAGGCATCAAAAGACATCAGGCCAAGAACGTTGAGAAGGTGTTGCACATTTTCGACCGCTTGGTTAACCAACGTTTGAAGCATAGGGAAGACACAAATGTTGATAGCCACAGGGACATGTTAGACGCCCTTCTCAATATTTCTCAAGAGAACAAGATGATGGACAAAACAATGATTGAGCACTTGTCACATGATCTGTTTGTTGCGGGAACGGATACGACAACATCTACACTAGAATGGGCAATGACTGAGTTAATACGCAATCCAGAGGTTATGTCAAAAGCAATAAAGGAACTCGAGCTAACCATTGGCAGAGGCAACCCTGTTGAGGAATCAGACATTGCTAGACTCCCTTACTTGCAAGCTATAATAAAAGAGACCTTTCGCTTGCACCCGCCAGTTCCATTTTTACTGCCTCGAAAAGCTGAGAGAGATGTGAACGTATGTGGCTACACCATCCCAAAGGATGCACAAGTGCTAGTTAATGTGTGGACTATTGCCAGGGATCCAACCATTTGGGACAATCCAGAATTGTTTTATCCGGAGAGGTTCCTAGGATCAAACATTGATGTGAAAGGCCAGAATTTTGAGCTTGCACCCTTTGGTTCTGGGAGGCGAATATGCCCCGGCATGCTGTTGGCAATGAGGATGTTGCTCTTGATGTTGGGTTCATTGCTCAGTTCCTTTAATTGGAAACTTGAAGATGGCATGAAAGTAGAGGATATGGACATGGATGATAAATTTGGTATCACCTTACAAAAGGCTCAACCCTTGCGAGTTGTTCCAGTGAAAATAAGCAATTAA 1500 0.442 MDFVSCALLILLTCATIHVLCSFLVRSRKPNYKLPPGPSPLPIVGNLLELGHKPHESLAKLAKIHGPVMSLKLGQITTVVVSSAEMAKEVLLTHDHSLSNRTIPQSVSVLNHENYSLAFIPVSPLWRDLRKICNGQLFSHKTLDASQDVRRKKVQQLLTEIHQSSQIGEAVDIGTAVFKTTINLLSNTIFSVDLVHSAGTAGEFKDLVTNITKLVGTPNLADYFPVLKMFDPQGIKRHQAKNVEKVLHIFDRLVNQRLKHREDTNVDSHRDMLDALLNISQENKMMDKTMIEHLSHDLFVAGTDTTTSTLEWAMTELIRNPEVMSKAIKELELTIGRGNPVEESDIARLPYLQAIIKETFRLHPPVPFLLPRKAERDVNVCGYTIPKDAQVLVNVWTIARDPTIWDNPELFYPERFLGSNIDVKGQNFELAPFGSGRRICPGMLLAMRMLLLMLGSLLSSFNWKLEDGMKVEDMDMDDKFGITLQKAQPLRVVPVKISN 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1257g00169 499 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00169 499 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00169 499 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00169 499 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00169 499 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00169 499 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00169 499 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00169 499 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00169 499 CDD CYP76-like 62 494 - -
Gabi1257g00169 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Gabi1257g00169 499 FunFam Cytochrome P450 76C4 26 493 - -
Gabi1257g00169 499 SUPERFAMILY Cytochrome P450 35 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00169 499 Pfam Cytochrome P450 35 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00169 499 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00169 499 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00169 499 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00169 499 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1257g00169 499 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 11 496 - -
Gabi1257g00169 499 Gene3D Cytochrome P450 24 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1257g00169 Gabi-Chr1257 1562483 1564096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1257g00169 1 496 Cytochrome P450 AT2G45550 47.233 9.28e-167 479