Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1257g00157 ATGTTTTCAAAATATGATTTTCTGAAGGATGTGAGTCCTGCCAAGGAGGACTGGAGGATTAAGGTGAAGGTGGTTCGGGCTTGGAAAGTTCATAACTTTCAACGTAGAGATTTTGACGACAATGTTGAAATGGTTTTATTGGATGAACATGGTGGTAGGATCCGCGCCACTGTCAAAGGTTCGTTGCCGATTCGGAAGAAAATCCACGAAGGAGACTGCTATTTTATAAAAAAAATTAGAGTTGGATTCAATAGCGATGTGTTCAGGCCAACCAAGCATCAATATCGTTTGTCTTTCAATTTGAGGACTGATCTTAAATCAATTGTTGATTCTAATCTTTCTGCGAGTGAATTTGATTTTGTTGATTATGACATCATTGAGAAAGAAACATCTGACTCTCCTTATTTAGTGGACGTCATTGGTTTAATCTCAGGAATTGGTGAAGTTTGTGAACGTGTGGTGTCTGGTAGGAAGACGAAAATGATTGTGTTGGAGCTTGACAACCTGAGGGGTCAAAAGCTGGAGTGCACTTTGTGGTTGCATTATGCGGATGAGGTCTAA 561 0.3993 MFSKYDFLKDVSPAKEDWRIKVKVVRAWKVHNFQRRDFDDNVEMVLLDEHGGRIRATVKGSLPIRKKIHEGDCYFIKKIRVGFNSDVFRPTKHQYRLSFNLRTDLKSIVDSNLSASEFDFVDYDIIEKETSDSPYLVDVIGLISGIGEVCERVVSGRKTKMIVLELDNLRGQKLECTLWLHYADEV 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1257g00157 186 CDD RPA1_DBD_A_like 19 103 - -
Gabi1257g00157 186 Pfam Domain of unknown function DUF223 43 133 IPR003871 -
Gabi1257g00157 186 Gene3D - 116 186 IPR012340 -
Gabi1257g00157 186 Gene3D - 7 111 IPR012340 -
Gabi1257g00157 186 SUPERFAMILY Nucleic acid-binding proteins 118 185 IPR012340 -
Gabi1257g00157 186 SUPERFAMILY Nucleic acid-binding proteins 6 109 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1257g00157 Gabi-Chr1257 1471114 1471941 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1257g00157 11 179 Core DNA Replication Machinery Family AT4G19130 23.699 8.43e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1257g00157 - - tpra:123908197 131.339